This is a list of active lineages which have been seen in the last year. A complete list of lineages can be found on the Pango designation GitHub and a JSON file containing the equivalent data from this page for the full set of lineages can be downloaded in JSON format here.
| Lineage | Most common countries | Earliest date | # designated | # assigned | Description | WHO Name |
|---|---|---|---|---|---|---|
| B | United States of America 40.0%, United Kingdom 15.0%, China 8.0%, Mexico 5.0%, Germany 3.0% | 2019-12-24 | 3999 | 10427 | One of the two original haplotypes of the pandemic(and first to be discovered) | |
| B.1 | United States of America 47.0%, Turkey 11.0%, United Kingdom 7.0%, Canada 4.0%, France 3.0% | 2020-01-01 | 46223 | 114856 | A large European lineage the origin of which roughly corresponds to the Northern Italian outbreak early in 2020. | |
| B.1.1 | United Kingdom 25.0%, United States of America 15.0%, Russia 6.0%, Japan 6.0%, Turkey 5.0% | 2020-01-19 | 22778 | 51644 | European lineage with 3 clear SNPs `28881GA`,`28882GA`,`28883GC` | |
| B.1.1.7 | United Kingdom 23.0%, United States of America 20.0%, Germany 9.0%, Sweden 6.0%, Denmark 6.0% | 2020-01-19 | 69634 | 1117891 | UK lineage of concern, associated with the N501Y mutation. More information can be found at cov-lineages.org/global_report.html | |
| B.1.1.28 | Brazil 83.0%, Philippines 8.0%, United States of America 3.0%, Paraguay 2.0%, Japan 1.0% | 2020-02-10 | 854 | 5604 | Brazil mostly, absorbed B.1.1.94 and B.1.1.143 | |
| P.1 | Brazil 59.0%, United States of America 26.0%, Chile 3.0%, Argentina 1.0%, Spain 1.0% | 2020-04-07 | 29942 | 73031 | Alias of B.1.1.28.1, Brazilian lineage with a number of spike mutations with likely functional significance E484K, K417T, and N501Y. Described in https://virological.org/t/genomic-characterisation-of-an-emergent-sars-cov-2-lineage-in-manaus-preliminary-findings/586, from #77 | |
| B.1.1.529 | United States of America 34.0%, Germany 13.0%, India 9.0%, Turkey 5.0%, Russia 5.0% | 2020-04-14 | 0 | 7716 | South Africa and Botswana lineage, from #343 | |
| BA.1 | United Kingdom 40.0%, United States of America 22.0%, Denmark 5.0%, Germany 4.0%, Brazil 4.0% | 2020-06-25 | 65813 | 425174 | Alias of B.1.1.529.1, from #361 | |
| BA.1.1 | United States of America 47.0%, United Kingdom 19.0%, Germany 7.0%, Canada 4.0%, France 2.0% | 2020-01-27 | 104388 | 971921 | Alias of B.1.1.529.1.1, from #360 | |
| BA.1.1.1 | France 32.0%, Germany 19.0%, United Kingdom 10.0%, Spain 6.0%, Poland 5.0% | 2020-10-29 | 15907 | 61475 | Alias of B.1.1.529.1.1.1, European lineage | |
| BA.1.1.18 | United States of America 96.0%, United Kingdom 1.0%, Canada 1.0%, Germany 0.0%, Mexico 0.0% | 2020-08-27 | 34558 | 65255 | Alias of B.1.1.529.1.1.18, USA lineage | |
| BA.1.15 | United States of America 69.0%, United Kingdom 13.0%, Canada 3.0%, Germany 2.0%, Brazil 2.0% | 2020-11-10 | 35155 | 181921 | Alias of B.1.1.529.1.15, lineage in USA and other countries | |
| BA.2 | United Kingdom 29.0%, Germany 13.0%, Denmark 12.0%, United States of America 11.0%, France 7.0% | 2020-03-28 | 112178 | 1203496 | Alias of B.1.1.529.2, from #361 | |
| BA.2.3.2 | Vietnam 27.0%, Japan 24.0%, United States of America 12.0%, Canada 8.0%, Australia 6.0% | 2022-01-22 | 618 | 2449 | Alias of B.1.1.529.2.3.2, Vietnam and Japan lineage | |
| CM.7.1.1 | France 32.0%, Israel 16.0%, Spain 16.0%, Netherlands 12.0%, Italy 12.0% | 2023-03-22 | 15 | 25 | Alias of B.1.1.529.2.3.20.7.1, S:R403K, Europe, from sars-cov-2-variants/lineage-proposals#37 | |
| BA.2.10.1 | Australia 23.0%, India 15.0%, United Kingdom 12.0%, United States of America 12.0%, Japan 8.0% | 2021-12-23 | 1668 | 8652 | Alias of B.1.1.529.2.10.1, lineage in Singapore and other countries | |
| BA.2.12.1 | United States of America 81.0%, Canada 5.0%, United Kingdom 2.0%, Germany 1.0%, Mexico 1.0% | 2020-04-15 | 39743 | 276157 | Alias of B.1.1.529.2.12.1, USA and Canada lineage, from #499 | |
| CH.1.1 | United Kingdom 27.0%, Germany 11.0%, United States of America 9.0%, South_Korea 6.0%, Denmark 4.0% | 2022-02-10 | 4924 | 19433 | Alias of B.1.1.529.2.75.3.4.1.1.1.1, defined by S:L452R, from #1113 | |
| CH.1.1.1 | United Kingdom 35.0%, Sweden 14.0%, Australia 9.0%, United States of America 5.0%, Germany 5.0% | 2022-10-15 | 2049 | 7019 | Alias of B.1.1.529.2.75.3.4.1.1.1.1.1, defined by S:N185D | |
| DV.7.1 | Spain 49.0%, United States of America 8.0%, France 7.0%, Canada 5.0%, United Kingdom 5.0% | 2023-05-11 | 45 | 1242 | Alias of B.1.1.529.2.75.3.4.1.1.1.1.1.7.1, S:L455F (G22927T), S:F456L (T22928C), Spain/Austria, from sars-cov-2-variants/lineage-proposals#135 | |
| DV.7.1.1 | Spain 38.0%, Canada 23.0%, United States of America 11.0%, Italy 5.0%, United Kingdom 4.0% | 2023-07-26 | 24 | 221 | Alias of B.1.1.529.2.75.3.4.1.1.1.1.1.7.1.1, S:K679R, on branch ORF1a:K3353R Spain, from sars-cov-2-variants/lineage-proposals#732 | |
| DV.7.1.2 | Spain 19.0%, United Kingdom 18.0%, Canada 13.0%, France 11.0%, United States of America 9.0% | 2023-06-17 | 145 | 674 | Alias of B.1.1.529.2.75.3.4.1.1.1.1.1.7.1.2, ORF1a:A4162V, Spain/England, from #2258 | |
| DV.7.1.3 | Spain 44.0%, United Kingdom 9.0%, Denmark 9.0%, Australia 7.0%, France 7.0% | 2023-08-07 | 33 | 222 | Alias of B.1.1.529.2.75.3.4.1.1.1.1.1.7.1.3, S:A262S, on branch ORF1a:K3353R, from sars-cov-2-variants/lineage-proposals#851 | |
| DV.7.1.4 | Canada 41.0%, Israel 15.0%, United States of America 15.0%, United Kingdom 5.0%, Italy 4.0% | 2023-06-20 | 470 | 1200 | Alias of B.1.1.529.2.75.3.4.1.1.1.1.1.7.1.4, G28001T, on branch ORF1a:K3353R | |
| DV.7.1.5 | Spain 25.0%, United States of America 13.0%, United Kingdom 10.0%, France 9.0%, Canada 9.0% | 2023-06-03 | 451 | 798 | Alias of B.1.1.529.2.75.3.4.1.1.1.1.1.7.1.5, N:T135A, Spain, from sars-cov-2-variants/lineage-proposals#729 | |
| KG.1 | Finland 35.0%, Spain 9.0%, Germany 7.0%, France 7.0%, Italy 7.0% | 2023-08-07 | 68 | 75 | Alias of B.1.1.529.2.75.3.4.1.1.1.1.1.7.1.5.1, S:M153I, from sars-cov-2-variants/lineage-proposals#951 | |
| KG.2 | Canada 67.0%, Spain 25.0%, United States of America 8.0% | 2023-10-05 | 11 | 12 | Alias of B.1.1.529.2.75.3.4.1.1.1.1.1.7.1.5.2, S:H49Y, S:A264D, S:G485R, Spain/Canada | |
| DV.7.1.9 | Australia 43.0%, New_Zealand 37.0%, Greece 6.0%, Japan 6.0%, Spain 4.0% | 2023-08-04 | 53 | 70 | Alias of B.1.1.529.2.75.3.4.1.1.1.1.1.7.1.9, S:R1185H, Australia | |
| FK.1.1 | New_Zealand 26.0%, Australia 25.0%, United States of America 16.0%, South_Korea 13.0%, Japan 8.0% | 2023-02-08 | 53 | 1580 | Alias of B.1.1.529.2.75.3.4.1.1.1.1.17.1.1, ORF1a:A1060T, on C27804T>ORF1b:L2580I>N:G34E branch, New Zealand, from #1881 | |
| JL.1 | Japan 88.0%, Canada 6.0%, United States of America 3.0%, South_Korea 2.0%, Netherlands 0.0% | 2023-05-29 | 92 | 342 | Alias of B.1.1.529.2.75.3.4.1.1.1.1.17.1.3.2.1, S:E1111Q, Japan, from #2168 | |
| JP.1.1 | South_Africa 70.0%, United Kingdom 20.0%, Netherlands 3.0%, United States of America 3.0%, Singapore 3.0% | 2023-06-05 | 16 | 30 | Alias of B.1.1.529.2.75.3.4.1.1.1.1.31.1.1, S:G1219V, ORF1a:T1542I, South Africa | |
| BN.1 | United States of America 29.0%, Australia 9.0%, Germany 7.0%, United Kingdom 7.0%, Denmark 5.0% | 2022-01-23 | 1492 | 5895 | Alias of B.1.1.529.2.75.5.1, mainly found in India, from #994 | |
| BN.1.1 | Japan 46.0%, South_Korea 17.0%, United States of America 15.0%, Vietnam 3.0%, Australia 3.0% | 2022-08-09 | 10 | 1009 | Alias of B.1.1.529.2.75.5.1.1, India/Austria, S:S494P, from #1176 | |
| BN.1.2 | South_Korea 28.0%, Japan 23.0%, United States of America 7.0%, Thailand 6.0%, Denmark 5.0% | 2022-01-24 | 2344 | 9480 | Alias of B.1.1.529.2.75.5.1.2, Singapore/England, E:D72G | |
| FR.1.4 | China 72.0%, Japan 23.0%, United States of America 2.0%, South_Korea 1.0%, Singapore 1.0% | 2023-04-06 | 121 | 217 | Alias of B.1.1.529.2.75.5.1.2.3.1.4, A3715G, C15960T, on shared T2372C, C7318T, ORF1a:L293F branch with FR.1.1, China, from sars-cov-2-variants/lineage-proposals#256 | |
| FR.1.5 | Japan 86.0%, United States of America 6.0%, China 4.0%, Taiwan 2.0%, Singapore 2.0% | 2023-03-01 | 18 | 51 | Alias of B.1.1.529.2.75.5.1.2.3.1.5, ORF1a:V116M, ORF1a:S2242F, ORF1a:M4071T, Japan | |
| BN.1.3 | South_Korea 25.0%, Japan 17.0%, Germany 11.0%, United States of America 10.0%, Australia 7.0% | 2022-01-02 | 3325 | 14768 | Alias of B.1.1.529.2.75.5.1.3, India, ORF3a:T229I | |
| DS.2 | Germany 52.0%, Austria 14.0%, United Kingdom 10.0%, United States of America 7.0%, Croatia 4.0% | 2022-10-26 | 170 | 561 | Alias of B.1.1.529.2.75.5.1.3.1.2, Germany, S:T572I | |
| BN.1.5.2 | United States of America 66.0%, Canada 12.0%, Netherlands 9.0%, France 5.0%, Belgium 2.0% | 2022-10-12 | 137 | 162 | Alias of B.1.1.529.2.75.5.1.5.2, S:N481K | |
| BA.2.86 | South_Africa 33.0%, United States of America 10.0%, Australia 6.0%, Netherlands 5.0%, Germany 5.0% | 2023-03-11 | 32 | 814 | Alias of B.1.1.529.2.86, from #2183 | |
| BA.2.86.1 | Japan 14.0%, United Kingdom 13.0%, Denmark 9.0%, United States of America 8.0%, France 7.0% | 2023-01-03 | 24 | 8568 | Alias of B.1.1.529.2.86.1, ORF1a:K1973R, mostly with C12815T, mainly Europe, from #2236 | |
| JN.1 | United States of America 32.0%, Canada 10.0%, United Kingdom 10.0%, Spain 6.0%, France 4.0% | 2023-01-02 | 2 | 78234 | Alias of B.1.1.529.2.86.1.1, S:L455S, ORF1a:R3821K, ORF7b:F19L, Europe | |
| JN.1.1 | France 22.0%, United States of America 21.0%, Canada 7.0%, United Kingdom 5.0%, Brazil 4.0% | 2022-02-28 | 695 | 17266 | Alias of B.1.1.529.2.86.1.1.1, ORF1a:F499L, C11747T, France, from sars-cov-2-variants/lineage-proposals#987 | |
| JN.1.1.1 | Sweden 34.0%, France 16.0%, United Kingdom 11.0%, United States of America 7.0%, Denmark 6.0% | 2023-09-25 | 24 | 482 | Alias of B.1.1.529.2.86.1.1.1.1, S:T572I on C9142T branch, France/Sweden/Poland, from sars-cov-2-variants/lineage-proposals#1097 | |
| JN.1.1.2 | France 40.0%, United States of America 16.0%, United Kingdom 6.0%, New_Zealand 5.0%, Belgium 4.0% | 2023-10-30 | 45 | 98 | Alias of B.1.1.529.2.86.1.1.1.2, S:G181E, France, from sars-cov-2-variants/lineage-proposals#1147 | |
| JN.1.1.3 | Sweden 23.0%, United Kingdom 16.0%, France 15.0%, Japan 15.0%, Italy 7.0% | 2023-11-04 | 68 | 61 | Alias of B.1.1.529.2.86.1.1.1.3, S:R346T | |
| JN.1.1.4 | France 46.0%, United States of America 19.0%, Spain 9.0%, United Kingdom 5.0%, South_Korea 4.0% | 2023-11-09 | 80 | 137 | Alias of B.1.1.529.2.86.1.1.1.4, S:V1264L on C9142T branch, from #2476 | |
| JN.1.1.5 | United States of America 29.0%, Brazil 21.0%, France 11.0%, Canada 9.0%, Japan 7.0% | 2023-11-10 | 45 | 149 | Alias of B.1.1.529.2.86.1.1.1.5, S:R346T on C9142T branch, from #2492 | |
| KR.1 | United States of America 41.0%, Canada 15.0%, Australia 11.0%, Singapore 7.0%, South_Korea 7.0% | 2024-01-06 | 10 | 27 | Alias of B.1.1.529.2.86.1.1.1.5.1, S:F456L, after C28498T, from sars-cov-2-variants/lineage-proposals#1253 | |
| JN.1.2 | United States of America 42.0%, Canada 41.0%, Greece 5.0%, United Kingdom 4.0%, Sweden 1.0% | 2023-01-03 | 43 | 2121 | Alias of B.1.1.529.2.86.1.1.2, S:M1229I, USA/Canada, from sars-cov-2-variants/lineage-proposals#1087 | |
| JN.1.2.1 | Ireland 60.0%, United Kingdom 29.0%, United States of America 8.0%, South_Africa 2.0%, France 2.0% | 2023-11-27 | 46 | 52 | Alias of B.1.1.529.2.86.1.1.2.1, S:H1101Y, Ireland, from sars-cov-2-variants/lineage-proposals#1322 | |
| JN.1.3 | United States of America 27.0%, Netherlands 12.0%, Switzerland 9.0%, Canada 7.0%, United Kingdom 5.0% | 2023-10-17 | 23 | 352 | Alias of B.1.1.529.2.86.1.1.3, ORF8:Q18*, Netherlands | |
| JN.1.4 | United States of America 44.0%, Canada 8.0%, South_Korea 6.0%, Denmark 6.0%, United Kingdom 6.0% | 2023-09-13 | 129 | 33461 | Alias of B.1.1.529.2.86.1.1.4, ORF1a:T170I, Denmark/Singapore, from #2381 | |
| JN.1.4.1 | Ireland 33.0%, United States of America 31.0%, United Kingdom 29.0%, Puerto_Rico 2.0%, Germany 2.0% | 2023-11-27 | 98 | 174 | Alias of B.1.1.529.2.86.1.1.4.1, S:E654V, Ireland, from sars-cov-2-variants/lineage-proposals#1175 | |
| JN.1.4.2 | United States of America 86.0%, South_Korea 5.0%, Canada 3.0%, United Kingdom 1.0%, Puerto_Rico 1.0% | 2023-11-17 | 388 | 824 | Alias of B.1.1.529.2.86.1.1.4.2, S:N185D, after T18453C, USA, from #2462 | |
| JN.1.4.3 | United States of America 68.0%, United Kingdom 9.0%, Canada 8.0%, Australia 3.0%, France 3.0% | 2023-11-14 | 36 | 173 | Alias of B.1.1.529.2.86.1.1.4.3, S:T572I, USA, from #2487 | |
| KQ.1 | United States of America 91.0%, United Kingdom 5.0%, Canada 3.0%, Puerto_Rico 1.0%, Netherlands 0.0% | 2024-01-04 | 64 | 253 | Alias of B.1.1.529.2.86.1.1.4.3.1, S:R346T, USA from #2487 | |
| JN.1.5 | Singapore 34.0%, South_Korea 11.0%, Japan 9.0%, Malaysia 9.0%, United States of America 8.0% | 2023-10-30 | 539 | 2205 | Alias of B.1.1.529.2.86.1.1.5, ORF1b:V1271T, Singapore/Malaysia/Indonesia, from #2419 | |
| JN.1.6 | United States of America 58.0%, Switzerland 8.0%, France 6.0%, Canada 5.0%, Malaysia 4.0% | 2023-10-11 | 141 | 967 | Alias of B.1.1.529.2.86.1.1.6, G22627A | |
| JN.1.6.1 | Sweden 54.0%, United States of America 17.0%, United Kingdom 16.0%, Spain 5.0%, Germany 4.0% | 2023-11-26 | 34 | 241 | Alias of B.1.1.529.2.86.1.1.6.1, S:R346T, Sweden, from sars-cov-2-variants/lineage-proposals#1089 | |
| JN.1.7 | United States of America 52.0%, United Kingdom 13.0%, Canada 9.0%, Ireland 5.0%, France 5.0% | 2023-01-09 | 75 | 3148 | Alias of B.1.1.529.2.86.1.1.7, S:T572I, S:E1150D, USA/France, from sars-cov-2-variants/lineage-proposals#1097 | |
| JN.1.7.1 | United Kingdom 98.0%, United States of America 2.0% | 2023-12-31 | 21 | 49 | Alias of B.1.1.529.2.86.1.1.7.1, S:R346K, England, from sars-cov-2-variants/lineage-proposals#1371 | |
| JN.1.7.2 | United States of America 41.0%, Canada 18.0%, United Kingdom 14.0%, Chile 10.0%, Argentina 8.0% | 2023-12-09 | 110 | 315 | Alias of B.1.1.529.2.86.1.1.7.2, ORF1b:C1563F, Americas | |
| JN.1.8 | United States of America 33.0%, United Kingdom 19.0%, Canada 8.0%, France 6.0%, Spain 5.0% | 2023-02-26 | 110 | 1416 | Alias of B.1.1.529.2.86.1.1.8, ORF7a:T28I | |
| JN.1.8.1 | United States of America 70.0%, Canada 18.0%, United Kingdom 3.0%, Puerto_Rico 1.0%, Denmark 1.0% | 2023-02-26 | 96 | 2255 | Alias of B.1.1.529.2.86.1.1.8.1, S:T572I, after A12928G, USA/Denmark, from sars-cov-2-variants/lineage-proposals#1097 | |
| JN.1.9 | United States of America 55.0%, United Kingdom 15.0%, Canada 11.0%, Spain 7.0%, Japan 2.0% | 2023-10-03 | 238 | 1603 | Alias of B.1.1.529.2.86.1.1.9, S:Q183H, USA/UK/Canada, from #2410 | |
| JN.1.9.1 | United Kingdom 64.0%, Australia 11.0%, Ireland 10.0%, United States of America 5.0%, Denmark 3.0% | 2023-12-04 | 26 | 157 | Alias of B.1.1.529.2.86.1.1.9.1, S:T572I, ORF1a:A3143V, from sars-cov-2-variants/lineage-proposals#1097 | |
| JN.1.10 | United States of America 18.0%, Germany 11.0%, Canada 11.0%, United Kingdom 10.0%, Spain 9.0% | 2023-11-07 | 29 | 128 | Alias of B.1.1.529.2.86.1.1.10, S:T95I, USA/Canada, from sars-cov-2-variants/lineage-proposals#1135 | |
| JN.1.11 | India 46.0%, United States of America 21.0%, Canada 9.0%, South_Korea 7.0%, Puerto_Rico 6.0% | 2023-12-07 | 2 | 221 | Alias of B.1.1.529.2.86.1.1.11, S:V1104L, G17334T, India, from #2446 | |
| JN.1.11.1 | Canada 33.0%, United States of America 26.0%, India 11.0%, United Kingdom 10.0%, Singapore 5.0% | 2023-12-23 | 17 | 386 | Alias of B.1.1.529.2.86.1.1.11.1, S:F456L, after ORF1a:T2283I, India, from sars-cov-2-variants/lineage-proposals#1253 | |
| KP.1 | United States of America 50.0%, Canada 29.0%, India 7.0%, Australia 4.0%, United Kingdom 4.0% | 2023-12-30 | 28 | 140 | Alias of B.1.1.529.2.86.1.1.11.1.1, S:K1086R, from sars-cov-2-variants/lineage-proposals#1364 | |
| KP.1.1 | United States of America 37.0%, Canada 13.0%, United Kingdom 11.0%, Singapore 11.0%, India 6.0% | 2024-01-27 | 8 | 127 | Alias of B.1.1.529.2.86.1.1.11.1.1.1, S:R346T, from sars-cov-2-variants/lineage-proposals#1089 | |
| KP.2 | United States of America 32.0%, India 17.0%, United Kingdom 13.0%, Canada 10.0%, Japan 7.0% | 2024-01-02 | 7 | 377 | Alias of B.1.1.529.2.86.1.1.11.1.2, S:R346T on JN.1.11.1 polytomy, from sars-cov-2-variants/lineage-proposals#1089 | |
| JN.1.12 | Italy 28.0%, United States of America 19.0%, South_Korea 19.0%, Poland 8.0%, Spain 6.0% | 2023-11-26 | 11 | 36 | Alias of B.1.1.529.2.86.1.1.12, S:F456V, ORF7a:A8T, from sars-cov-2-variants/lineage-proposals#1253 | |
| JN.1.13 | United States of America 79.0%, Canada 7.0%, Thailand 3.0%, United Kingdom 3.0%, Hong_Kong 3.0% | 2023-12-10 | 21 | 29 | Alias of B.1.1.529.2.86.1.1.13, S:A1087S, after C26894T, C25680T, USA, from #2464 | |
| JN.1.13.1 | United States of America 80.0%, Canada 14.0%, United Kingdom 2.0%, Puerto_Rico 1.0%, Singapore 1.0% | 2023-12-07 | 241 | 685 | Alias of B.1.1.529.2.86.1.1.13.1, S:R346T, S:F59S, USA, from sars-cov-2-variants/lineage-proposals/issues/1386 | |
| JN.1.14 | United States of America 92.0%, Taiwan 4.0%, Puerto_Rico 2.0%, Dominican_Republic 2.0% | 2023-12-20 | 23 | 52 | Alias of B.1.1.529.2.86.1.1.14, S:R346S, after C26894T, C25680T, USA | |
| JN.1.15 | United States of America 36.0%, Spain 11.0%, United Kingdom 7.0%, Israel 6.0%, Switzerland 6.0% | 2023-11-09 | 50 | 267 | Alias of B.1.1.529.2.86.1.1.15, S:A688V | |
| JN.1.16 | United States of America 21.0%, United Kingdom 14.0%, South_Korea 10.0%, Australia 9.0%, China 8.0% | 2023-11-07 | 47 | 933 | Alias of B.1.1.529.2.86.1.1.16, S:F456L, from sars-cov-2-variants/lineage-proposals#1253 | |
| JN.1.17 | United States of America 96.0%, Canada 2.0%, Netherlands 1.0%, France 1.0%, Italy 1.0% | 2023-02-08 | 58 | 118 | Alias of B.1.1.529.2.86.1.1.17, S:A222V, USA | |
| JN.1.18 | United States of America 31.0%, United Kingdom 12.0%, Nigeria 7.0%, Canada 5.0%, South_Africa 5.0% | 2023-11-02 | 140 | 1632 | Alias of B.1.1.529.2.86.1.1.18, S:R346T, directly on JN.1 polytomy, from sars-cov-2-variants/lineage-proposals#1089 | |
| JN.1.19 | United States of America 29.0%, Netherlands 12.0%, Denmark 12.0%, United Kingdom 11.0%, Israel 5.0% | 2023-10-02 | 715 | 1312 | Alias of B.1.1.529.2.86.1.1.19, ORF8:I71V | |
| JN.1.20 | South_Korea 53.0%, United States of America 12.0%, Australia 7.0%, China 6.0%, Canada 4.0% | 2023-01-02 | 66 | 742 | Alias of B.1.1.529.2.86.1.1.20, S:S31F, directly on JN.1 polytomy | |
| JN.1.21 | Chile 37.0%, United States of America 21.0%, Austria 6.0%, Switzerland 4.0%, Canada 4.0% | 2023-11-08 | 128 | 359 | Alias of B.1.1.529.2.86.1.1.21, S:H1058Y, from sars-cov-2-variants/lineage-proposals#1162 | |
| JN.1.22 | Canada 34.0%, United States of America 20.0%, United Kingdom 9.0%, Belgium 4.0%, Spain 4.0% | 2023-10-22 | 1541 | 2707 | Alias of B.1.1.529.2.86.1.1.22, ORF1a:S505F, C13019T, from #2465 | |
| JN.1.23 | Brazil 64.0%, United States of America 18.0%, Canada 8.0%, Australia 4.0%, Portugal 2.0% | 2024-01-01 | 49 | 50 | Alias of B.1.1.529.2.86.1.1.23, S:K444R, S:Y453F, ORF1a:A307V, ORF1a:P2144L, Brazil, from #2488 | |
| JN.1.24 | United States of America 59.0%, United Kingdom 11.0%, Costa_Rica 6.0%, Israel 5.0%, Netherlands 4.0% | 2023-11-10 | 117 | 158 | Alias of B.1.1.529.2.86.1.1.24, S:C1243F, USA | |
| JN.1.25 | India 52.0%, United States of America 35.0%, Canada 4.0%, Spain 4.0%, Sweden 4.0% | 2023-12-12 | 25 | 23 | Alias of B.1.1.529.2.86.1.1.25, C706T, A7708T, India | |
| JN.1.25.1 | United States of America 42.0%, United Kingdom 29.0%, India 25.0%, Canada 4.0% | 2023-12-17 | 17 | 24 | Alias of B.1.1.529.2.86.1.1.25.1, S:R346T, India | |
| JN.2 | Sweden 35.0%, United Kingdom 17.0%, Canada 13.0%, United States of America 8.0%, Denmark 5.0% | 2022-10-22 | 111 | 3778 | Alias of B.1.1.529.2.86.1.2, ORF1a:Y621C, Europe/North America, from #2284 | |
| JN.2.1 | Sweden 43.0%, Australia 32.0%, United Kingdom 5.0%, Canada 4.0%, Japan 4.0% | 2023-09-11 | 26 | 183 | Alias of B.1.1.529.2.86.1.2.1, S:S31F, Sweden/Australia | |
| JN.2.2 | Netherlands 45.0%, Germany 13.0%, Turkey 11.0%, United Kingdom 7.0%, Sweden 6.0% | 2023-10-27 | 41 | 109 | Alias of B.1.1.529.2.86.1.2.2, S:T572I, N:G25C, ORF1a:L3644F, Netherlands, from #2433 | |
| JN.2.3 | Denmark 27.0%, Sweden 17.0%, Netherlands 12.0%, Slovakia 10.0%, France 6.0% | 2023-10-01 | 92 | 143 | Alias of B.1.1.529.2.86.1.2.3, S:V193L, from #2442 | |
| JN.2.4 | Sweden 74.0%, Greece 16.0%, United Kingdom 5.0%, United States of America 1.0%, Spain 1.0% | 2023-10-02 | 48 | 73 | Alias of B.1.1.529.2.86.1.2.4, S:L242F, Sweden | |
| JN.2.5 | Canada 86.0%, United States of America 6.0%, Brazil 4.0%, United Kingdom 2.0%, Sweden 1.0% | 2023-10-30 | 85 | 711 | Alias of B.1.1.529.2.86.1.2.5, S:L455S, Canada, USA, Lithuania, from sars-cov-2-variants/lineage-proposals#1173 | |
| JN.3 | United States of America 27.0%, United Kingdom 25.0%, Israel 10.0%, Spain 7.0%, Denmark 4.0% | 2023-08-05 | 46 | 1553 | Alias of B.1.1.529.2.86.1.3, ORF1a:T2087I, Europe, from sars-cov-2-variants/lineage-proposals#892 | |
| JN.3.1 | Spain 38.0%, Sweden 16.0%, Norway 16.0%, Lithuania 11.0%, France 6.0% | 2023-08-27 | 28 | 63 | Alias of B.1.1.529.2.86.1.3.1, S:L922F, ORF7a:T28I, Spain | |
| JN.3.2 | United Kingdom 39.0%, France 32.0%, Canada 10.0%, Ireland 6.0%, Netherlands 3.0% | 2023-09-18 | 35 | 31 | Alias of B.1.1.529.2.86.1.3.2, N:H300Y, ORF1a:P892S, from #2445 | |
| JN.3.2.1 | Germany 55.0%, United States of America 10.0%, Switzerland 10.0%, France 6.0%, Denmark 4.0% | 2023-11-07 | 24 | 51 | Alias of B.1.1.529.2.86.1.3.2.1, S:F456V, N:S327L, Germany, from #2445 | |
| JN.4 | Belgium 32.0%, United Kingdom 13.0%, Netherlands 11.0%, France 10.0%, Luxembourg 6.0% | 2023-09-18 | 40 | 543 | Alias of B.1.1.529.2.86.1.4, S:A475V, lacking C12815T of most BA.2.86.1, Belgium/Netherlands/Denmark, from sars-cov-2-variants/lineage-proposals#1009 | |
| JN.5 | United Kingdom 21.0%, Greece 19.0%, France 17.0%, United States of America 7.0%, Netherlands 5.0% | 2023-08-21 | 65 | 355 | Alias of B.1.1.529.2.86.1.5, N:T135I | |
| JN.5.1 | United Kingdom 74.0%, France 11.0%, Poland 5.0%, Netherlands 5.0%, Belgium 5.0% | 2023-10-19 | 14 | 19 | Alias of B.1.1.529.2.86.1.5.1, S:A475S, T2950A, A28052G, C29541T, England/Belgium, from sars-cov-2-variants/lineage-proposals#954 | |
| JN.6 | United Kingdom 49.0%, United States of America 8.0%, Lithuania 8.0%, Denmark 7.0%, Finland 5.0% | 2023-09-12 | 36 | 691 | Alias of B.1.1.529.2.86.1.6, S:V193L | |
| JN.7 | Denmark 69.0%, Slovakia 14.0%, Germany 7.0%, Austria 2.0%, Japan 2.0% | 2023-08-14 | 22 | 162 | Alias of B.1.1.529.2.86.1.7, S:G594S, Denmark, from sars-cov-2-variants/lineage-proposals#856 | |
| JN.8 | Sweden 60.0%, Japan 34.0%, Denmark 2.0%, Luxembourg 2.0%, Germany 1.0% | 2023-08-13 | 26 | 131 | Alias of B.1.1.529.2.86.1.8, S:T299I, Sweden/Denmark | |
| JN.9 | Netherlands 40.0%, United Kingdom 12.0%, Denmark 11.0%, Greece 6.0%, Japan 6.0% | 2023-08-21 | 33 | 328 | Alias of B.1.1.529.2.86.1.9, S:M1229I, Netherlands | |
| JN.10 | Spain 34.0%, United Kingdom 14.0%, Poland 7.0%, Italy 7.0%, United States of America 7.0% | 2023-09-05 | 25 | 336 | Alias of B.1.1.529.2.86.1.10, S:A475V, on T3565C branch with JN.1, Spain/France, from sars-cov-2-variants/lineage-proposals#954 | |
| JN.11 | Denmark 23.0%, Japan 21.0%, United States of America 14.0%, South_Korea 9.0%, Singapore 7.0% | 2023-04-12 | 81 | 301 | Alias of B.1.1.529.2.86.1.11, S:V1104L, Asia, from sars-cov-2-variants/lineage-proposals#1303 | |
| JN.12 | Poland 39.0%, Germany 19.0%, Sweden 13.0%, Netherlands 10.0%, Spain 3.0% | 2023-11-09 | 15 | 31 | Alias of B.1.1.529.2.86.1.12, S:F456V, ORF1a:A498G, from sars-cov-2-variants/lineage-proposals#1102 | |
| JN.13 | United States of America 36.0%, Canada 20.0%, Australia 13.0%, New_Zealand 7.0%, South_Korea 7.0% | 2023-10-13 | 56 | 61 | Alias of B.1.1.529.2.86.1.13, A14397G | |
| JN.13.1 | United States of America 30.0%, Malaysia 30.0%, Japan 16.0%, United Kingdom 10.0%, Canada 6.0% | 2023-10-28 | 43 | 50 | Alias of B.1.1.529.2.86.1.13.1, S:A475V, USA/Malaysia, from sars-cov-2-variants/lineage-proposals#1386 | |
| BA.2.86.2 | South_Africa 35.0%, United Kingdom 25.0%, Mauritius 9.0%, Australia 7.0%, United States of America 5.0% | 2023-07-24 | 26 | 374 | Alias of B.1.1.529.2.86.2, ORF7a:E22D, South Africa/Botswana，from sars-cov-2-variants/lineage-proposals/issues/756 | |
| BA.2.86.3 | Japan 25.0%, United Kingdom 20.0%, Australia 12.0%, South_Africa 10.0%, Denmark 5.0% | 2023-08-10 | 11 | 342 | Alias of B.1.1.529.2.86.3, C222T, C1960T, T12775C, South Africa | |
| JQ.1 | Denmark 48.0%, United States of America 13.0%, France 12.0%, Sweden 7.0%, United Kingdom 6.0% | 2023-08-17 | 17 | 326 | Alias of B.1.1.529.2.86.3.1, S:T95I, Denmark/France/South Africa, from sars-cov-2-variants/lineage-proposals#906 | |
| JQ.2 | South_Africa 61.0%, Canada 28.0%, United Kingdom 6.0%, Germany 3.0%, Netherlands 3.0% | 2023-09-28 | 5 | 36 | Alias of B.1.1.529.2.86.3.2, S:R346T, G2944A, South Africa, from #2505 | |
| BA.2.86.4 | United Kingdom 45.0%, Japan 14.0%, Thailand 7.0%, United States of America 7.0%, Luxembourg 7.0% | 2023-09-14 | 17 | 29 | Alias of B.1.1.529.2.86.4, S:A222V, ORF1a:V3892A, from sars-cov-2-variants/lineage-proposals#1032 | |
| BA.2.86.5 | United Kingdom 53.0%, Finland 16.0%, France 11.0%, Netherlands 9.0%, Lithuania 4.0% | 2023-10-02 | 8 | 57 | Alias of B.1.1.529.2.86.5, S:I197V, C5575T, T6085C, T23278C | |
| BA.4.4 | United States of America 60.0%, United Kingdom 8.0%, Costa_Rica 7.0%, Mexico 4.0%, Germany 3.0% | 2020-07-20 | 1030 | 7755 | Alias of B.1.1.529.4.4, USA lineage | |
| BA.4.6 | United States of America 60.0%, Canada 7.0%, United Kingdom 6.0%, France 3.0%, Denmark 3.0% | 2020-02-02 | 1179 | 53143 | Alias of B.1.1.529.4.6, mainly found in USA, England and Denmark, from #741 | |
| BA.5.1 | United States of America 18.0%, Germany 11.0%, France 10.0%, United Kingdom 10.0%, Denmark 7.0% | 2020-03-14 | 23500 | 229086 | Alias of B.1.1.529.5.1, Portugal lineage | |
| BA.5.1.17 | France 52.0%, Germany 10.0%, United States of America 5.0%, Denmark 4.0%, Belgium 4.0% | 2021-11-15 | 801 | 1961 | Alias of B.1.1.529.5.1.17, France lineage | |
| DE.2 | United States of America 21.0%, Germany 14.0%, United Kingdom 11.0%, Netherlands 7.0%, Canada 6.0% | 2022-09-16 | 44 | 228 | Alias of B.1.1.529.5.1.23.2, S:R346T, S:G181V, T4579A | |
| BA.5.1.30 | United States of America 34.0%, Germany 7.0%, United Kingdom 7.0%, France 6.0%, Canada 6.0% | 2021-08-26 | 999 | 17821 | Alias of B.1.1.529.5.1.30, ORF6:D6G | |
| BA.5.2 | Japan 17.0%, United States of America 17.0%, Germany 7.0%, United Kingdom 6.0%, Russia 5.0% | 2020-07-02 | 10665 | 277807 | Alias of B.1.1.529.5.2, mainly found in South Africa, England and USA, from #551 | |
| BA.5.2.1 | United States of America 38.0%, Japan 12.0%, Germany 5.0%, Canada 5.0%, United Kingdom 5.0% | 2020-07-06 | 14516 | 290098 | Alias of B.1.1.529.5.2.1, mainly found in South Africa, England and USA, from #657 | |
| BF.5.1 | Japan 94.0%, Israel 2.0%, France 1.0%, United Kingdom 0.0%, South_Korea 0.0% | 2022-06-26 | 206 | 1234 | Alias of B.1.1.529.5.2.1.5.1 found mainly in Japan and Israel, from #1475 | |
| BF.7.14.1 | China 92.0%, Japan 3.0%, South_Korea 2.0%, United States of America 1.0%, Singapore 1.0% | 2022-11-04 | 86 | 785 | Alias of B.1.1.529.5.2.1.7.14.1 found mainly in China and Japan, contains S:V83F branch, from #1580 | |
| BF.14 | Austria 18.0%, Germany 17.0%, United States of America 13.0%, Denmark 7.0%, Czech_Republic 6.0% | 2022-01-16 | 2516 | 6720 | Alias of B.1.1.529.5.2.1.14, mainly found in Austria, from #843 | |
| BA.5.2.6 | Japan 29.0%, United States of America 21.0%, Germany 8.0%, United Kingdom 5.0%, Indonesia 4.0% | 2022-01-02 | 4021 | 16497 | Alias of B.1.1.529.5.2.6, global lineage, S:R346T, from #870 | |
| BA.5.2.12 | Japan 96.0%, United States of America 1.0%, Germany 1.0%, Thailand 0.0%, United Kingdom 0.0% | 2022-01-06 | 700 | 6196 | Alias of B.1.1.529.5.2.12, Japan lineage | |
| BA.5.2.33 | United States of America 21.0%, Australia 13.0%, Japan 11.0%, United Kingdom 10.0%, Russia 8.0% | 2020-07-22 | 599 | 1709 | Alias of B.1.1.529.5.2.33, UK lineage, defined by ORF8:P93S | |
| BA.5.2.48 | China 92.0%, Japan 2.0%, South_Korea 1.0%, Singapore 1.0%, United States of America 1.0% | 2022-09-29 | 1327 | 2960 | Alias of B.1.1.529.5.2.48, China, C2710T, C8626T, T17208C, from #1471 | |
| BA.5.3.1 | Germany 14.0%, United States of America 14.0%, South_Africa 9.0%, United Kingdom 7.0%, Israel 7.0% | 2020-07-01 | 853 | 7736 | Alias of B.1.1.529.5.3.1, mainly found in South Africa, Austria, and England, from #625 | |
| BE.1 | United States of America 28.0%, United Kingdom 16.0%, Germany 6.0%, Australia 5.0%, Denmark 4.0% | 2020-07-01 | 1837 | 28667 | Alias of B.1.1.529.5.3.1.1, mainly found in South Africa, Austria and England, from #625 | |
| BE.1.1 | Germany 39.0%, United States of America 11.0%, Denmark 7.0%, United Kingdom 7.0%, Japan 4.0% | 2022-01-24 | 6604 | 56921 | Alias of B.1.1.529.5.3.1.1.1, Germany lineage | |
| BQ.1 | United States of America 52.0%, Canada 7.0%, United Kingdom 6.0%, Germany 5.0%, Sweden 4.0% | 2021-12-28 | 8913 | 50738 | Alias of B.1.1.529.5.3.1.1.1.1.1, Nigeria lineage, from #993 | |
| BQ.1.1 | United States of America 30.0%, France 11.0%, Canada 8.0%, United Kingdom 8.0%, Germany 5.0% | 2020-10-15 | 9868 | 161042 | Alias of B.1.1.529.5.3.1.1.1.1.1.1, found globally, defining mutations ORF1b:N1191S and S:R346T, from #993 | |
| BQ.1.1.4 | United States of America 39.0%, France 12.0%, Argentina 7.0%, United Kingdom 6.0%, Germany 5.0% | 2022-01-18 | 3036 | 10365 | Alias of B.1.1.529.5.3.1.1.1.1.1.1.4, T29173C | |
| BQ.1.1.10 | Sweden 24.0%, United States of America 21.0%, Germany 12.0%, Canada 11.0%, United Kingdom 7.0% | 2022-04-27 | 925 | 3058 | Alias of B.1.1.529.5.3.1.1.1.1.1.1.10, S:Y144-, T16413C, Denmark/Germany | |
| BQ.1.1.18 | United States of America 24.0%, France 23.0%, Germany 7.0%, Spain 5.0%, United Kingdom 5.0% | 2021-12-28 | 167 | 9623 | Alias of B.1.1.529.5.3.1.1.1.1.1.1.18, France, C6541T | |
| BQ.1.1.46 | France 41.0%, Germany 9.0%, United Kingdom 8.0%, Canada 7.0%, Slovenia 6.0% | 2022-01-02 | 133 | 809 | Alias of B.1.1.529.5.3.1.1.1.1.1.1.46 France, S:F157L | |
| BQ.1.1.57 | United States of America 48.0%, United Kingdom 30.0%, Spain 6.0%, Ireland 4.0%, France 3.0% | 2022-09-28 | 400 | 509 | Alias of B.1.1.529.5.3.1.1.1.1.1.1.57 S:S256A | |
| JH.2 | United States of America 31.0%, France 27.0%, Canada 15.0%, Belgium 8.0%, Finland 8.0% | 2023-07-24 | 4 | 26 | Alias of B.1.1.529.5.3.1.1.1.1.1.2.2.2, S:A484K, S:V486A, USA/Canada/Finland, from sars-cov-2-variants/lineage-proposals#650, from #2068, from #2068, from #2068, from #2068, from #2068, from #2068 | |
| BQ.1.10 | United States of America 38.0%, France 6.0%, Germany 5.0%, Canada 5.0%, United Kingdom 5.0% | 2022-01-15 | 73 | 7246 | Alias of B.1.1.529.5.3.1.1.1.1.1.10, international lineage, 27600T | |
| BQ.1.12 | United States of America 71.0%, Canada 16.0%, United Kingdom 3.0%, Germany 1.0%, Austria 1.0% | 2022-07-25 | 2519 | 6756 | Alias of B.1.1.529.5.3.1.1.1.1.1.12, international lineage, 28849T | |
| BQ.1.27 | United States of America 85.0%, Netherlands 6.0%, Japan 1.0%, United Kingdom 1.0%, Puerto_Rico 1.0% | 2022-10-04 | 67 | 229 | Alias of B.1.1.529.5.3.1.1.1.1.1.27, USA/England, S:V445A | |
| BW.1 | Mexico 52.0%, United States of America 30.0%, Canada 6.0%, Costa_Rica 3.0%, Austria 2.0% | 2022-01-03 | 10 | 833 | Alias of B.1.1.529.5.6.2.1, Mexico lineage, defined by S:460K, from #1059 | |
| B.1.351 | South_Africa 20.0%, Philippines 9.0%, United States of America 9.0%, Sweden 8.0%, Germany 7.0% | 2020-02-18 | 1279 | 32846 | Lineage of concern detected in South Africa | |
| B.1.427 | United States of America 98.0%, Mexico 1.0%, Aruba 0.0%, Canada 0.0%, Argentina 0.0% | 2020-04-11 | 863 | 21899 | USA lineage (CA) | |
| B.1.617 | India 79.0%, United Kingdom 5.0%, Australia 4.0%, United States of America 3.0%, Canada 2.0% | 2020-03-06 | 1 | 2968 | Predominantly India lineage with several spike mutations, from #38 | |
| B.1.617.2 | India 22.0%, Turkey 16.0%, United States of America 14.0%, Germany 7.0%, United Kingdom 7.0% | 2020-03-27 | 8273 | 278711 | Predominantly India lineage with several spike mutations, from #49 | |
| GL.1 | South_Korea 20.0%, Australia 16.0%, United States of America 11.0%, Canary_Islands 10.0%, Portugal 8.0% | 2023-03-26 | 7 | 356 | Alias of XAY.1.1.1.1, Europe, S:D420N, C19441T, from #2032 | |
| XBB | India 21.0%, United States of America 20.0%, United Kingdom 6.0%, Indonesia 5.0%, Russia 4.0% | 2022-01-10 | 724 | 3487 | Recombinant lineage of BJ.1 and BM.1.1.1 with breakpoint in S1, found in USA and Singapore, from #1058 | |
| XBB.1 | United States of America 25.0%, Indonesia 7.0%, Singapore 7.0%, Malaysia 6.0%, United Kingdom 5.0% | 2022-01-04 | 5861 | 25698 | Mostly Bangladesh and Singapore, defined by S:G252V, from #1088 | |
| XBB.1.5 | United States of America 55.0%, Canada 8.0%, United Kingdom 7.0%, Spain 3.0%, Germany 3.0% | 2020-04-04 | 9307 | 172043 | USA, S:F486P | |
| XBB.1.5.10 | United States of America 70.0%, Canada 9.0%, Puerto_Rico 6.0%, France 1.0%, Spain 1.0% | 2021-01-22 | 52 | 2737 | S:F456L (T22928C), USA-NC, from #1614 | |
| XBB.1.5.13 | United States of America 35.0%, United Kingdom 16.0%, France 7.0%, Germany 7.0%, Canada 5.0% | 2022-02-20 | 989 | 7469 | T21880C, G28079T | |
| FD.1.1 | Canada 72.0%, United States of America 21.0%, United Kingdom 1.0%, Italy 1.0%, Spain 1.0% | 2022-12-31 | 52 | 2082 | Alias of XBB.1.5.15.1.1, S:F456L (T22928C), Canada-QC | |
| FD.5.1 | Peru 47.0%, United States of America 28.0%, Chile 7.0%, Ecuador 7.0%, Canada 4.0% | 2023-04-25 | 131 | 348 | Alias of XBB.1.5.15.5.1, S:F456L (T22928C), S:N185D, Peru, from sars-cov-2-variants/lineage-proposals#385 | |
| XBB.1.5.16 | United States of America 51.0%, United Kingdom 12.0%, Ireland 10.0%, Germany 3.0%, Spain 2.0% | 2022-11-24 | 553 | 2414 | T14766C, USA | |
| XBB.1.5.17 | United States of America 70.0%, Canada 8.0%, South_Korea 6.0%, Austria 1.0%, Germany 1.0% | 2022-11-21 | 758 | 3734 | C23635T, USA | |
| XBB.1.5.20 | United States of America 35.0%, United Kingdom 18.0%, Canada 12.0%, France 10.0%, Germany 3.0% | 2022-03-22 | 587 | 3119 | C9532T, USA | |
| XBB.1.5.21 | United States of America 53.0%, Germany 9.0%, Canada 8.0%, United Kingdom 4.0%, Australia 3.0% | 2022-12-02 | 363 | 1962 | ORF1a:K322R, C22945T, USA | |
| EU.1.1 | United States of America 19.0%, Germany 16.0%, Denmark 7.0%, Austria 7.0%, United Kingdom 5.0% | 2023-01-30 | 92 | 2020 | Alias of XBB.1.5.26.1.1, S:I410V, Germany/Netherlands, from #1688 | |
| XBB.1.5.27 | United States of America 93.0%, Sweden 2.0%, Canada 2.0%, South_Korea 1.0%, New_Zealand 1.0% | 2023-01-13 | 63 | 359 | S:K478R, on T11431C branch, USA | |
| XBB.1.5.28 | United States of America 55.0%, Spain 10.0%, Mexico 8.0%, United Kingdom 7.0%, Canada 4.0% | 2022-12-26 | 57 | 899 | S:K478R, on 17124C polytomy, USA | |
| XBB.1.5.37 | Spain 17.0%, United States of America 13.0%, Germany 10.0%, Netherlands 8.0%, France 8.0% | 2022-03-05 | 314 | 3882 | S:K1045R, Europe | |
| GG.1 | Greece 22.0%, Italy 13.0%, United States of America 12.0%, Croatia 11.0%, Sweden 7.0% | 2023-02-08 | 44 | 181 | Alias of XBB.1.5.38.1 S:478R, Europe, from sars-cov-2-variants/lineage-proposals#48 | |
| FT.3.1 | United States of America 51.0%, Mexico 33.0%, United Kingdom 15.0%, Canada 1.0% | 2023-05-17 | 19 | 94 | Alias of XBB.1.5.39.3.1, S:K478R, S:D1168H, Canada/USA, from sars-cov-2-variants/lineage-proposals#266 | |
| FT.3.1.1 | United States of America 71.0%, Canada 15.0%, Mexico 7.0%, United Kingdom 2.0%, Netherlands 1.0% | 2023-05-02 | 22 | 285 | Alias of XBB.1.5.39.3.1.1, S:A348S, USA, from #2140 | |
| HC.2 | Canada 57.0%, United States of America 25.0%, Trinidad_and_Tobago 6.0%, Denmark 3.0%, Italy 2.0% | 2023-06-11 | 23 | 123 | Alias of XBB.1.5.44.2, S:F157L, Canada, from #2202 | |
| FZ.1.1 | United Kingdom 76.0%, Japan 11.0%, Sweden 4.0%, United States of America 2.0%, France 2.0% | 2022-05-12 | 108 | 211 | Alias of XBB.1.5.47.1.1, S:L858I, England/Scotland | |
| XBB.1.5.48 | United States of America 55.0%, United Kingdom 11.0%, Canada 9.0%, France 6.0%, Mexico 2.0% | 2022-11-28 | 1769 | 2399 | A24730T, USA/Canada/England | |
| XBB.1.5.49 | United States of America 68.0%, Mexico 10.0%, Canada 9.0%, United Kingdom 2.0%, Germany 1.0% | 2022-03-09 | 1375 | 4011 | T6886C, USA | |
| XBB.1.5.54 | Austria 22.0%, Germany 21.0%, Switzerland 12.0%, Kosovo 11.0%, France 6.0% | 2023-01-30 | 70 | 136 | C14358T,C20016T,C29311T, Central/Eastern Europe | |
| HP.1.1 | United States of America 45.0%, Mexico 38.0%, Canada 11.0%, Spain 2.0%, United Kingdom 1.0% | 2023-04-29 | 29 | 264 | Alias of XBB.1.5.55.1.1, S:478R, Mexico, from sars-cov-2-variants/lineage-proposals#277 | |
| XBB.1.5.67 | United States of America 64.0%, Canada 12.0%, Spain 8.0%, Ukraine 2.0%, United Kingdom 2.0% | 2022-11-17 | 1329 | 1865 | C21691T, USA | |
| HZ.1 | United States of America 90.0%, Mexico 2.0%, Guatemala 1.0%, United Kingdom 1.0%, Spain 1.0% | 2023-03-12 | 129 | 961 | Alias of XBB.1.5.68.1, S:K478R, 23266T, USA, from sars-cov-2-variants/lineage-proposals#514 | |
| HZ.2 | United States of America 73.0%, United Kingdom 9.0%, Canada 4.0%, Australia 3.0%, Spain 3.0% | 2022-05-17 | 237 | 503 | Alias of XBB.1.5.68.2, ORF1a:H3580Y, USA | |
| XBB.1.5.70 | Brazil 54.0%, United States of America 23.0%, Spain 4.0%, Italy 4.0%, France 2.0% | 2023-01-18 | 2 | 691 | S:L455F (G22927T), S:F456L (T22928C), ORF1a:A4068S, Brazil, from #1982 | |
| GK.1 | Brazil 41.0%, United States of America 18.0%, Spain 7.0%, France 5.0%, Italy 3.0% | 2022-12-16 | 113 | 1180 | Alias of XBB.1.5.70.1, S:S704L, Brazil, from #2025 | |
| GK.1.1 | Japan 32.0%, Brazil 20.0%, United States of America 20.0%, Canada 8.0%, United Kingdom 3.0% | 2023-05-09 | 6 | 5511 | Alias of XBB.1.5.70.1.1, S:T573I, Brazil | |
| GK.1.1.1 | United States of America 40.0%, Chile 26.0%, Canada 9.0%, Argentina 5.0%, Greece 3.0% | 2022-10-02 | 174 | 1079 | Alias of XBB.1.5.70.1.1.1, C28432T | |
| GK.1.2.1 | Brazil 58.0%, United States of America 17.0%, Canada 12.0%, Chile 6.0%, Puerto_Rico 1.0% | 2023-08-21 | 12 | 267 | Alias of XBB.1.5.70.1.2.1, S:A475V, ORF1a:D147G, ORF1a:D2592Y, ORF1a:T4175I, ORF1b:N1426K, Brazil/Colombia, from #2314 | |
| GK.1.3 | United States of America 52.0%, Canada 32.0%, Denmark 8.0%, United Kingdom 3.0%, France 1.0% | 2023-01-24 | 53 | 109 | Alias of XBB.1.5.70.1.3, ORF1a:E633A, ORF1b:D1130G, USA/Canada, from sars-cov-2-variants/lineage-proposals#179 | |
| GK.1.4 | United States of America 51.0%, Brazil 40.0%, Sweden 3.0%, Peru 1.0%, Netherlands 1.0% | 2023-07-11 | 5 | 95 | Alias of XBB.1.5.70.1.4, S:478R, S:98F, Brazil, from sars-cov-2-variants/lineage-proposals#504 | |
| GK.1.5 | Brazil 77.0%, United States of America 11.0%, Canada 3.0%, Greece 3.0%, Sweden 2.0% | 2023-06-10 | 14 | 119 | Alias of XBB.1.5.70.1.5, S:F186L, ORF1a:T1597I, Brazil | |
| GK.1.6 | United States of America 42.0%, Spain 13.0%, Colombia 9.0%, France 7.0%, United Kingdom 5.0% | 2023-06-26 | 128 | 185 | Alias of XBB.1.5.70.1.6, ORF3a:V50I, Colombia, from sars-cov-2-variants/lineage-proposals#643 | |
| GK.1.6.1 | United States of America 63.0%, Canada 4.0%, Greece 3.0%, Colombia 3.0%, Japan 3.0% | 2023-08-06 | 17 | 214 | Alias of XBB.1.5.70.1.6.1, S:A475V, ORF1a:I114V, Colombia, from sars-cov-2-variants/lineage-proposals#643 | |
| GK.1.8 | Brazil 64.0%, United States of America 14.0%, Canada 10.0%, France 2.0%, Chile 1.0% | 2023-07-15 | 18 | 837 | Alias of XBB.1.5.70.1.8, S:E554K, S:A475V, Brazil, from sars-cov-2-variants/lineage-proposals#643 | |
| GK.1.8.1 | United States of America 36.0%, Brazil 31.0%, Canada 10.0%, Paraguay 10.0%, Sweden 10.0% | 2023-09-13 | 30 | 39 | Alias of XBB.1.5.70.1.8.1, S:K187I, S:A222P, Brazil/Paraguay, from sars-cov-2-variants/lineage-proposals#1127 | |
| GK.1.10 | Brazil 45.0%, United States of America 27.0%, Canada 9.0%, Denmark 4.0%, United Kingdom 4.0% | 2023-06-15 | 133 | 251 | Alias of XBB.1.5.70.1.10, Orf1a:I573V, Orf1a:T4129I, Orf9b:T95M, Brazil, from #2375 | |
| GK.1.10.1 | Brazil 82.0%, United States of America 14.0%, Philippines 5.0% | 2023-09-11 | 17 | 22 | Alias of XBB.1.5.70.1.10.1, S:A475V, C29668T, Brazil, from #2479 | |
| KN.1 | Brazil 100.0% | 2023-09-20 | 23 | 22 | Alias of XBB.1.5.70.1.10.1.1, S:Y200C, Brazil, from #2479 | |
| KN.1.1 | Brazil 97.0%, United States of America 3.0% | 2023-11-22 | 22 | 38 | Alias of XBB.1.5.70.1.10.1.1.1, S:N450D, Brazil, from #2479 | |
| GK.1.11 | Brazil 55.0%, United States of America 31.0%, Peru 7.0%, Spain 3.0%, Italy 3.0% | 2023-07-03 | 15 | 58 | Alias of XBB.1.5.70.1.11, S:A475V, ORF1a:P309L, Brazil, from sars-cov-2-variants/lineage-proposals#643 | |
| GK.1.11.1 | Brazil 75.0%, Canada 14.0%, United States of America 7.0%, Netherlands 2.0%, Paraguay 2.0% | 2023-08-07 | 15 | 44 | Alias of XBB.1.5.70.1.11.1, S:I68V, Brazil | |
| GK.2 | United States of America 48.0%, Canada 21.0%, Japan 6.0%, United Kingdom 5.0%, Spain 3.0% | 2023-02-21 | 8 | 1080 | Alias of XBB.1.5.70.2, S:V511I, from sars-cov-2-variants/lineage-proposals#300 | |
| GK.2.1 | Spain 26.0%, France 20.0%, United States of America 12.0%, United Kingdom 8.0%, Italy 5.0% | 2023-04-19 | 103 | 1564 | Alias of XBB.1.5.70.2.1, ORF1a:L624I, ORF1a:L3641S, ORF1b:S763C | |
| GK.2.4 | United States of America 83.0%, Canada 13.0%, Italy 1.0%, Japan 1.0%, Ireland 1.0% | 2023-08-30 | 16 | 69 | Alias of XBB.1.5.70.2.4, S:K356T, USA-NY, from sars-cov-2-variants/lineage-proposals#823 | |
| GK.3.1 | United States of America 60.0%, Canada 31.0%, New_Zealand 1.0%, Puerto_Rico 1.0%, France 1.0% | 2023-07-11 | 5 | 667 | Alias of XBB.1.5.70.3.1, S:A475V, USA, from sars-cov-2-variants/lineage-proposals#643 | |
| GK.4 | France 23.0%, United States of America 18.0%, Italy 18.0%, Spain 13.0%, Netherlands 7.0% | 2023-07-31 | 16 | 195 | Alias of XBB.1.5.70.4, S:A475V, ORF1a:T2859I, ORF1ab:T4711I, from #2276 | |
| GK.8.1 | Canada 38.0%, United States of America 33.0%, United Kingdom 12.0%, Brazil 5.0%, France 3.0% | 2023-09-06 | 14 | 58 | Alias of XBB.1.5.70.8.1, S:N185I, S:A475V, from sars-cov-2-variants/lineage-proposals#909 | |
| GK.10 | Brazil 63.0%, France 21.0%, Belgium 5.0%, Italy 3.0%, United States of America 3.0% | 2023-05-18 | 16 | 75 | Alias of XBB.1.5.70.10, S:E554G, Brazil, from sars-cov-2-variants/lineage-proposals#761 | |
| XBB.1.5.71 | Spain 75.0%, United Kingdom 6.0%, United States of America 4.0%, France 4.0%, Italy 3.0% | 2023-02-01 | 124 | 716 | S:V511I, Spain | |
| XBB.1.5.72 | United States of America 56.0%, Canada 11.0%, Colombia 10.0%, Spain 4.0%, Panama 2.0% | 2023-01-13 | 34 | 2333 | S:F456L (T22928C), ORF1a:G445S, T9823C, T10204C, South America | |
| XBB.1.5.73 | United States of America 37.0%, Peru 34.0%, Japan 9.0%, Canada 6.0%, South_Korea 2.0% | 2022-12-22 | 590 | 1548 | T28271C, USA/Peru | |
| GN.1 | Peru 51.0%, United States of America 26.0%, Costa_Rica 5.0%, Canada 2.0%, Spain 2.0% | 2023-04-07 | 137 | 1149 | Alias of XBB.1.5.73.1, S:F456L (T22928C), Peru/Costa Rica | |
| GN.1.1 | Peru 60.0%, United States of America 24.0%, Canada 12.0%, Spain 1.0%, Chile 1.0% | 2023-05-05 | 25 | 599 | Alias of XBB.1.5.73.1.1, ORF1b:A1643V, Peru | |
| GN.1.2 | United States of America 80.0%, Honduras 5.0%, Sweden 5.0%, Guatemala 2.0%, Ireland 2.0% | 2023-06-16 | 31 | 44 | Alias of XBB.1.5.73.1.2, S:Q321L | |
| GN.1.3 | United Kingdom 29.0%, France 24.0%, Italy 10.0%, United States of America 10.0%, Sweden 10.0% | 2023-08-30 | 8 | 21 | Alias of XBB.1.5.73.1.3, S:L455F (G22927T), from sars-cov-2-variants/lineage-proposals#816 | |
| GN.1.4 | Peru 87.0%, United States of America 9.0%, Costa_Rica 2.0%, Canada 1.0%, Ecuador 1.0% | 2023-08-17 | 87 | 127 | Alias of XBB.1.5.73.1.4, S:G181V, Peru, from #2349 | |
| HR.1.1 | Canada 61.0%, United States of America 26.0%, Costa_Rica 7.0%, Australia 1.0%, Sweden 1.0% | 2023-07-05 | 288 | 353 | Alias of XBB.1.5.77.1.1, S:K304N, Costa Rica, from #2372 | |
| XBB.1.5.82 | Sweden 75.0%, Reunion 22.0%, France 3.0% | 2023-01-27 | 53 | 60 | S:K444R, Sweden/Reunion | |
| XBB.1.5.83 | South_Africa 66.0%, Japan 12.0%, United States of America 3.0%, United Kingdom 3.0%, Spain 3.0% | 2023-01-21 | 73 | 178 | A10624G, South Africa | |
| XBB.1.5.86 | Brazil 55.0%, United States of America 13.0%, Japan 4.0%, South_Korea 4.0%, Canada 3.0% | 2022-12-01 | 571 | 1110 | ORF1a:G2868S, Brazil | |
| XBB.1.5.89 | France 23.0%, United States of America 15.0%, Italy 12.0%, Spain 10.0%, Senegal 9.0% | 2023-03-27 | 38 | 231 | S:478R, S:554A, Canada/Italy/France, from sars-cov-2-variants/lineage-proposals#175 | |
| HY.1 | United States of America 65.0%, Mexico 20.0%, Canada 9.0%, United Kingdom 2.0%, Germany 1.0% | 2023-03-27 | 52 | 701 | Alias of XBB.1.5.100.1, S:478R, USA/Mexico, from sars-cov-2-variants/lineage-proposals#453 | |
| XBB.1.5.102 | Brazil 86.0%, United States of America 6.0%, French_Guiana 2.0%, France 2.0%, Chile 1.0% | 2022-12-09 | 486 | 665 | C6896T, C14085T, C19488T, Brazil-Amazonas | |
| JD.1 | Brazil 55.0%, United States of America 15.0%, France 5.0%, Australia 5.0%, Canada 4.0% | 2023-05-11 | 15 | 504 | Alias of XBB.1.5.102.1, S:L455F (G22927T), S:F456L (T22928C), A14634G, T28282C, Brazil, from #2071 | |
| JD.1.1 | United States of America 24.0%, Spain 10.0%, Brazil 9.0%, Canada 9.0%, United Kingdom 7.0% | 2023-01-01 | 29 | 9024 | Alias of XBB.1.5.102.1.1, S:A475V, Brazil/USA/Spain, from #2174 | |
| JD.1.1.1 | Brazil 32.0%, United States of America 21.0%, Canada 18.0%, France 4.0%, Spain 3.0% | 2023-01-08 | 15 | 2641 | Alias of XBB.1.5.102.1.1.1, S:Y248H, from sars-cov-2-variants/lineage-proposals#864 | |
| JD.1.1.2 | Canada 30.0%, Ireland 24.0%, United States of America 16.0%, United Kingdom 12.0%, Sweden 11.0% | 2023-07-27 | 24 | 146 | Alias of XBB.1.5.102.1.1.2, S:E583D, Ireland/UK, from sars-cov-2-variants/lineage-proposals#754 | |
| JD.1.1.3 | France 39.0%, United States of America 18.0%, Canada 7.0%, Japan 5.0%, Italy 4.0% | 2023-08-14 | 8 | 592 | Alias of XBB.1.5.102.1.1.3, S:T470N, ORF1a:V1584M, France/Denmark, from sars-cov-2-variants/lineage-proposals#896 | |
| JD.1.1.4 | Australia 69.0%, Ireland 13.0%, Japan 5.0%, United Kingdom 3.0%, Germany 2.0% | 2023-09-22 | 49 | 126 | Alias of XBB.1.5.102.1.1.4, S:E554G, Australia, from #2380 | |
| JD.1.1.5 | United States of America 74.0%, Canada 21.0%, Japan 3.0%, New_Zealand 1.0%, France 1.0% | 2023-09-18 | 45 | 175 | Alias of XBB.1.5.102.1.1.5, S:Q677R, USA/Canada, from sars-cov-2-variants/lineage-proposals#1079 | |
| JD.1.1.6 | United States of America 41.0%, Brazil 34.0%, Canada 14.0%, Germany 3.0%, Slovakia 2.0% | 2023-09-27 | 17 | 92 | Alias of XBB.1.5.102.1.1.6, S:M153V, Brazil | |
| JD.1.1.7 | United States of America 21.0%, France 16.0%, Belgium 10.0%, Canada 8.0%, Spain 6.0% | 2022-10-30 | 480 | 1105 | Alias of XBB.1.5.102.1.1.7, ORF1b:R2257S | |
| JD.1.1.8 | Brazil 50.0%, United States of America 18.0%, Canada 9.0%, United Kingdom 5.0%, France 2.0% | 2023-07-22 | 264 | 1391 | Alias of XBB.1.5.102.1.1.8, ORF1a:N1094K, without C19185T, Brazil | |
| KK.1 | United States of America 77.0%, Brazil 7.0%, Canada 4.0%, United Kingdom 2.0%, Greece 2.0% | 2023-08-24 | 140 | 252 | Alias of XBB.1.5.102.1.1.8.1, S:D1153H, Brazil/USA, from sars-cov-2-variants/lineage-proposals#1210 | |
| KK.2 | Brazil 96.0%, United States of America 4.0% | 2023-10-05 | 34 | 54 | Alias of XBB.1.5.102.1.1.8.2, S:N481K, Brazil, from sars-cov-2-variants/lineage-proposals#1277 | |
| JD.1.2 | Brazil 63.0%, United States of America 17.0%, New_Zealand 5.0%, Australia 4.0%, Finland 3.0% | 2023-03-11 | 33 | 191 | Alias of XBB.1.5.102.1.2, S:P1162S, Brazil, from sars-cov-2-variants/lineage-proposals#136 | |
| JD.1.2.1 | Canada 34.0%, United States of America 26.0%, Brazil 22.0%, Ecuador 8.0%, Puerto_Rico 3.0% | 2023-08-08 | 57 | 103 | Alias of XBB.1.5.102.1.2.1, S:E554Q, from sars-cov-2-variants/lineage-proposals#870 | |
| JD.1.2.2 | Brazil 78.0%, United States of America 12.0%, Netherlands 4.0%, Israel 2.0%, Spain 2.0% | 2023-06-02 | 39 | 51 | Alias of XBB.1.5.102.1.2.2, S:A1078T, Brazil | |
| XBB.1.5.103 | United States of America 49.0%, Argentina 31.0%, Canada 10.0%, Belgium 1.0%, Brazil 1.0% | 2023-04-18 | 60 | 261 | S:F456L (T22928C), S:180/184del, S:N185D, ORF1a:T1437I, ORF7b:C41W, T21357C, Argentina, from #2192 | |
| KA.1 | Argentina 20.0%, United States of America 19.0%, Spain 15.0%, Paraguay 10.0%, Sweden 5.0% | 2023-06-06 | 64 | 177 | Alias of XBB.1.5.103.1, S:E554K, Argentina/France/Spain, from sars-cov-2-variants/lineage-proposals#822 | |
| XBB.1.5.106 | Guatemala 57.0%, United States of America 40.0%, Canada 2.0%, Costa_Rica 1.0% | 2023-03-20 | 124 | 134 | S:A623V, ORF1a:V28I, ORF1a:R3542H, Guatemala, from #2270 | |
| XBB.1.5.109 | United States of America 26.0%, United Kingdom 10.0%, Canada 9.0%, South_Korea 9.0%, Venezuela 7.0% | 2023-05-11 | 147 | 149 | S:F456L (T22928C), ORF1a:T654A, from #2262 | |
| XBB.1.5.110 | United States of America 64.0%, Mexico 12.0%, Canada 9.0%, Ecuador 5.0%, Sweden 3.0% | 2022-12-23 | 640 | 632 | ORF1aT4129I, Mexico | |
| XBB.1.9 | United States of America 18.0%, United Kingdom 12.0%, Indonesia 9.0%, Germany 7.0%, Russia 7.0% | 2022-09-29 | 422 | 3489 | ORF1a:G1819S, ORF1a:T4175I, on ORF9b:I5T branch | |
| XBB.1.9.1 | United States of America 12.0%, United Kingdom 9.0%, Russia 6.0%, France 6.0%, Japan 5.0% | 2022-01-16 | 264 | 14440 | S:F486P (after C11956T), Indonesia/Singapore/Malaysia/England | |
| FL.1.5 | United States of America 21.0%, France 16.0%, Spain 14.0%, Canada 8.0%, United Kingdom 7.0% | 2023-04-11 | 26 | 759 | Alias of XBB.1.9.1.1.5, S:F456L (T22928C), ORF1b:K2557R, from #2036 | |
| FL.1.5.1 | United States of America 62.0%, Canada 10.0%, United Kingdom 5.0%, France 3.0%, Spain 2.0% | 2022-10-12 | 32 | 14442 | Alias of XBB.1.9.1.1.5.1, S:478R, from #2036 | |
| HN.1 | United States of America 74.0%, Canada 9.0%, Spain 4.0%, Sweden 2.0%, France 2.0% | 2023-02-20 | 15 | 835 | Alias of XBB.1.9.1.1.5.1.1, S:A67S, Dominican Republic, from sars-cov-2-variants/lineage-proposals#408 | |
| HN.2 | Canada 42.0%, United States of America 42.0%, Ukraine 3.0%, Ireland 3.0%, United Kingdom 2.0% | 2023-02-17 | 183 | 486 | Alias of XBB.1.9.1.1.5.1.2, ORF1b:P223S, from sars-cov-2-variants/lineage-proposals#676 | |
| HN.2.1 | Spain 30.0%, France 17.0%, United Kingdom 10.0%, United States of America 9.0%, Lithuania 4.0% | 2023-07-10 | 123 | 217 | Alias of XBB.1.9.1.1.5.1.2.1, S:Q836R, from sars-cov-2-variants/lineage-proposals#676 | |
| HN.3.1 | United States of America 77.0%, Canada 14.0%, New_Zealand 3.0%, Austria 1.0%, Dominican_Republic 1.0% | 2023-07-28 | 54 | 119 | Alias of XBB.1.9.1.1.5.1.3.1, S:D253G, from sars-cov-2-variants/lineage-proposals#383 | |
| HN.4 | United States of America 31.0%, Russia 14.0%, Canada 9.0%, United Kingdom 8.0%, Australia 4.0% | 2023-05-30 | 316 | 960 | Alias of XBB.1.9.1.1.5.1.4, ORF1a:T403I | |
| HN.4.1.1 | New_Zealand 80.0%, Australia 10.0%, Canada 3.0%, Japan 3.0%, United States of America 3.0% | 2023-10-17 | 17 | 61 | Alias of XBB.1.9.1.1.5.1.4.1.1, S:I68T, S:L452R, S:E554K, New Zealand/Canada, from sars-cov-2-variants/lineage-proposals#1054 | |
| HN.4.2 | Georgia 36.0%, Greece 12.0%, France 11.0%, Russia 10.0%, Singapore 6.0% | 2023-08-18 | 62 | 81 | Alias of XBB.1.9.1.1.5.1.4.2, S:Q14H, Georgia/Russia, from sars-cov-2-variants/lineage-proposals#971 | |
| HN.5 | United States of America 20.0%, Canada 15.0%, Turkey 6.0%, Russia 6.0%, Australia 5.0% | 2023-01-12 | 60 | 822 | Alias of XBB.1.9.1.1.5.1.5, S:E554K, from sars-cov-2-variants/lineage-proposals#936 | |
| HN.6 | Brazil 32.0%, United States of America 21.0%, France 18.0%, United Kingdom 6.0%, Canada 4.0% | 2023-05-26 | 373 | 886 | Alias of XBB.1.9.1.1.5.1.6, ORF1a:D1933A | |
| HN.7 | United States of America 27.0%, Spain 16.0%, Sweden 15.0%, Ukraine 15.0%, France 11.0% | 2023-06-16 | 157 | 196 | Alias of XBB.1.9.1.1.5.1.7, C6388T, T20028C, C20115T, Europe | |
| HN.8 | Haiti 40.0%, United States of America 37.0%, Mexico 14.0%, Canada 6.0%, Brazil 3.0% | 2023-09-11 | 32 | 65 | Alias of XBB.1.9.1.1.5.1.8, S:ins248KRD, ORF1a:E2042D, not requiring S:494P, Haiti/USA, from #2438 | |
| FL.1.5.2 | United States of America 39.0%, Sweden 17.0%, Australia 6.0%, Ukraine 6.0%, France 4.0% | 2023-06-26 | 85 | 195 | Alias of XBB.1.9.1.1.5.2, S:N481K, S:H681R, England/France/Denmark, from sars-cov-2-variants/lineage-proposals#614 | |
| KC.1 | Canada 28.0%, United States of America 17.0%, United Kingdom 14.0%, France 12.0%, Spain 5.0% | 2023-01-13 | 707 | 1449 | Alias of XBB.1.9.1.1.5.2.1, S:S490P, ORF1a:T4129I, ORF1a:S723F, Europe, from sars-cov-2-variants/lineage-proposals#614 | |
| KC.1.1 | United Kingdom 37.0%, United States of America 22.0%, France 8.0%, Italy 7.0%, Switzerland 7.0% | 2023-09-08 | 49 | 101 | Alias of XBB.1.9.1.1.5.2.1.1, S:V1228L, England | |
| FL.1.8 | Russia 57.0%, United Kingdom 9.0%, Netherlands 7.0%, United States of America 6.0%, Israel 5.0% | 2023-06-05 | 63 | 99 | Alias of XBB.1.9.1.1.8, S:K478R, S:P521T, M:I8V, Russia, from sars-cov-2-variants/lineage-proposals#1058 | |
| FL.3.1 | United Kingdom 47.0%, United States of America 9.0%, Denmark 8.0%, France 5.0%, Canada 3.0% | 2023-01-15 | 751 | 1313 | Alias of XBB.1.9.1.3.1, ORF1a:T2264I, England | |
| FL.3.2 | Spain 41.0%, United Kingdom 32.0%, United States of America 5.0%, France 4.0%, Italy 2.0% | 2023-01-03 | 423 | 986 | Alias of XBB.1.9.1.3.2, T8830C, England/Spain | |
| FL.4 | China 16.0%, United States of America 15.0%, Japan 11.0%, Spain 6.0%, France 6.0% | 2022-12-27 | 311 | 7373 | Alias of XBB.1.9.1.4, ORF1b:V1092F | |
| FL.5 | United States of America 13.0%, France 9.0%, United Kingdom 7.0%, Japan 7.0%, Canada 6.0% | 2022-04-17 | 159 | 3614 | Alias of XBB.1.9.1.5, N:T362I | |
| FL.13 | France 15.0%, United States of America 9.0%, Germany 9.0%, Canada 8.0%, United Kingdom 6.0% | 2022-12-25 | 783 | 1363 | Alias of XBB.1.9.1.13, G4354A | |
| FL.13.4 | China 50.0%, United Kingdom 17.0%, Turkey 8.0%, Qatar 8.0%, Pakistan 8.0% | 2023-05-10 | 10 | 12 | Alias of XBB.1.9.1.13.4, S:K182E, S:F456L (T22928C), Pakistan, from sars-cov-2-variants/lineage-proposals#638 | |
| FL.13.4.1 | Sweden 31.0%, Qatar 31.0%, United States of America 11.0%, Canada 4.0%, Russia 4.0% | 2023-08-10 | 12 | 266 | Alias of XBB.1.9.1.13.4.1, S:Q14H, S:A484K, from sars-cov-2-variants/lineage-proposals#638 | |
| FL.13.5 | Chile 44.0%, United States of America 21.0%, Argentina 12.0%, Canada 7.0%, Spain 6.0% | 2023-07-11 | 36 | 72 | Alias of XBB.1.9.1.13.5, S:F456L (T22928C), ORF1a:T1000I, ORF1a:L2527M, Chile/Argentina, from sars-cov-2-variants/lineage-proposals#692 | |
| FL.15 | United States of America 22.0%, South_Korea 17.0%, Canada 12.0%, Japan 8.0%, France 6.0% | 2023-03-09 | 53 | 1860 | Alias of XBB.1.9.1.15, S:F456L (T22928C), ORF1a:E637K, Vietnam/China/South Korea, from #1994 | |
| FL.15.1 | Canada 42.0%, Japan 22.0%, France 8.0%, Germany 5.0%, Italy 5.0% | 2023-06-30 | 8 | 40 | Alias of XBB.1.9.1.15.1, S:L455F (G22927T), ORF1a:T2007I, on ORF1a:S2185N branch, from #2293 | |
| FL.15.1.1 | Italy 14.0%, United States of America 14.0%, Sweden 9.0%, United Kingdom 6.0%, France 5.0% | 2023-08-10 | 7 | 1317 | Alias of XBB.1.9.1.15.1.1, S:A475V, Canada/Romania/Belgium, from sars-cov-2-variants/lineage-proposals#646 | |
| KF.1 | Canada 59.0%, Australia 26.0%, United States of America 10.0%, Thailand 1.0%, Malaysia 1.0% | 2023-09-07 | 46 | 86 | Alias of XBB.1.9.1.15.1.1.1, S:P251H, Australia/Canada, from sars-cov-2-variants/lineage-proposals#890 | |
| KF.2 | Australia 91.0%, New_Zealand 7.0%, United Kingdom 2.0% | 2023-10-01 | 20 | 44 | Alias of XBB.1.9.1.15.1.1.2, S:E183D, England/Australia/New Zealand, from sars-cov-2-variants/lineage-proposals#1111 | |
| FL.15.4 | Japan 27.0%, Singapore 16.0%, United States of America 13.0%, South_Korea 10.0%, Vietnam 8.0% | 2023-05-15 | 123 | 168 | Alias of XBB.1.9.1.15.4, S:Q14H, on G6819A branch, from #2359 | |
| FL.16 | China 58.0%, United States of America 15.0%, South_Korea 8.0%, Japan 5.0%, Canada 3.0% | 2023-04-25 | 154 | 686 | Alias of XBB.1.9.1.16, S:D215V, C3511T, China, from #2001 | |
| FL.20 | Spain 28.0%, Canada 19.0%, United States of America 15.0%, France 8.0%, New_Zealand 4.0% | 2023-04-29 | 24 | 1042 | Alias of XBB.1.9.1.20, S:F456L (T22928C), S:Q52H, Spain, from #2072 | |
| FL.20.1 | United Kingdom 36.0%, United States of America 8.0%, Slovenia 8.0%, Japan 6.0%, France 5.0% | 2023-05-17 | 14 | 385 | Alias of XBB.1.9.1.20.1, S:L455W, Northern Ireland/England, from #2145 | |
| FL.20.2 | United States of America 33.0%, Sweden 21.0%, Canada 12.0%, France 5.0%, Italy 4.0% | 2023-04-10 | 44 | 492 | Alias of XBB.1.9.1.20.2, S:478R, from sars-cov-2-variants/lineage-proposals#571 | |
| FL.21 | United States of America 45.0%, South_Korea 27.0%, France 5.0%, China 4.0%, United Kingdom 3.0% | 2023-01-24 | 282 | 294 | Alias of XBB.1.9.1.21, A10564T | |
| FL.22 | Japan 23.0%, United States of America 19.0%, Australia 10.0%, Philippines 9.0%, China 8.0% | 2023-01-26 | 308 | 500 | Alias of XBB.1.9.1.22, ORF1b:I1416V, T24184C | |
| FL.24 | Japan 30.0%, United States of America 21.0%, China 11.0%, South_Korea 9.0%, Russia 8.0% | 2023-03-30 | 87 | 638 | Alias of XBB.1.9.1.24, S:Q613H, S:A688V, from sars-cov-2-variants/lineage-proposals#284 | |
| FL.24.1 | Russia 63.0%, Poland 5.0%, Canada 5.0%, United States of America 5.0%, United Kingdom 2.0% | 2023-05-08 | 449 | 770 | Alias of XBB.1.9.1.24.1, S:478R, T9139C, C24919T, Russia, from sars-cov-2-variants/lineage-proposals#789 | |
| FL.25 | United States of America 51.0%, Finland 10.0%, United Kingdom 6.0%, Canada 6.0%, Spain 5.0% | 2023-02-15 | 128 | 553 | Alias of XBB.1.9.1.25, S:E554K, USA/England, from #2040 | |
| FL.33 | Ukraine 13.0%, Romania 12.0%, United States of America 9.0%, Ireland 8.0%, Germany 8.0% | 2023-02-06 | 310 | 329 | Alias of XBB.1.9.1.33, ORF1b:A1377V | |
| FL.36 | United States of America 25.0%, Australia 13.0%, United Kingdom 9.0%, Sweden 9.0%, Belgium 9.0% | 2023-08-21 | 12 | 128 | Alias of XBB.1.9.1.36, S:76I, S:190S, S:356T, S:572I, S:899S, S:1070T, England/US/Denmark, sars-cov-2-variants/lineage-proposals#805 | |
| XBB.1.9.2 | United States of America 13.0%, South_Korea 11.0%, United Kingdom 10.0%, Spain 7.0%, France 7.0% | 2022-11-24 | 36 | 8149 | S:F486P (after A27507C, A16878T), Indonesia/Singapore, from #1602 | |
| EG.2 | Indonesia 38.0%, Japan 14.0%, United States of America 10.0%, China 7.0%, Australia 5.0% | 2023-01-08 | 28 | 2613 | Alias of XBB.1.9.2.2, S:478R, Indonesia | |
| EG.2.2 | Japan 92.0%, Indonesia 2.0%, China 1.0%, Singapore 1.0%, United States of America 1.0% | 2023-03-31 | 46 | 250 | Alias of XBB.1.9.2.2.2, S:K304N, Indonesia/Japan, from sars-cov-2-variants/lineage-proposals#517 | |
| EG.4 | United States of America 21.0%, Japan 9.0%, France 9.0%, Singapore 6.0%, South_Korea 6.0% | 2023-01-04 | 400 | 1427 | Alias of XBB.1.9.2.4, C28651T | |
| EG.5 | United States of America 33.0%, South_Korea 25.0%, Greece 10.0%, China 8.0%, Spain 5.0% | 2023-02-17 | 5 | 732 | Alias of XBB.1.9.2.5, S:F456L (T22930A), ORF1a:A690V, ORF1a:A3143V, Indonesia, from #1918 | |
| EG.5.1 | United States of America 25.0%, Japan 22.0%, South_Korea 10.0%, Canada 8.0%, Spain 4.0% | 2023-01-31 | 21 | 15212 | Alias of XBB.1.9.2.5.1, S:Q52H | |
| EG.5.1.1 | China 18.0%, United States of America 18.0%, South_Korea 11.0%, Japan 11.0%, Canada 9.0% | 2020-12-22 | 67 | 34571 | Alias of XBB.1.9.2.5.1.1, China, from #2020 | |
| HK.1 | China 47.0%, United States of America 11.0%, Japan 8.0%, Canada 6.0%, South_Korea 5.0% | 2023-05-13 | 32 | 621 | Alias of XBB.1.9.2.5.1.1.1, S:G257V, China, from sars-cov-2-variants/lineage-proposals#359 | |
| HK.1.2 | New_Zealand 59.0%, China 12.0%, Australia 9.0%, Japan 7.0%, United States of America 6.0% | 2023-07-04 | 51 | 823 | Alias of XBB.1.9.2.5.1.1.1.2, S:L455F (G22927C), S:T307I, China/New Zealand , from sars-cov-2-variants/lineage-proposals#631 | |
| HK.2 | China 43.0%, South_Korea 8.0%, France 7.0%, Denmark 7.0%, Japan 7.0% | 2023-05-29 | 13 | 316 | Alias of XBB.1.9.2.5.1.1.2, S:Q14H, China, from sars-cov-2-variants/lineage-proposals#432 | |
| HK.2.1 | Singapore 39.0%, South_Korea 26.0%, China 10.0%, Japan 7.0%, United States of America 3.0% | 2023-08-07 | 58 | 632 | Alias of XBB.1.9.2.5.1.1.2.1, S:L455F (G22927T), Singapore, from sars-cov-2-variants/lineage-proposals#537 | |
| HK.3 | South_Korea 26.0%, China 13.0%, United States of America 12.0%, Canada 8.0%, Singapore 7.0% | 2022-12-12 | 65 | 19876 | Alias of XBB.1.9.2.5.1.1.3, S:L455F (G22927T), China, from sars-cov-2-variants/lineage-proposals#414 | |
| HK.3.1 | China 23.0%, United States of America 12.0%, South_Korea 8.0%, Japan 8.0%, New_Zealand 7.0% | 2023-07-31 | 29 | 1906 | Alias of XBB.1.9.2.5.1.1.3.1, S:F157L, China, from #2193 | |
| HK.3.2 | China 25.0%, Japan 14.0%, South_Korea 13.0%, United States of America 10.0%, Australia 5.0% | 2023-01-01 | 920 | 4770 | Alias of XBB.1.9.2.5.1.1.3.2, S:Q14K, C853T, China，from sars-cov-2-variants/lineage-proposals#730 | |
| HK.3.2.1 | Canada 69.0%, United States of America 12.0%, Italy 3.0%, China 2.0%, Spain 2.0% | 2023-08-02 | 86 | 416 | Alias of XBB.1.9.2.5.1.1.3.2.1, S:Q677H, Canada, from #2362 | |
| HK.3.2.2 | United States of America 35.0%, Australia 13.0%, Greece 9.0%, Japan 8.0%, Sweden 6.0% | 2023-09-11 | 32 | 289 | Alias of XBB.1.9.2.5.1.1.3.2.2, ORF8:M1L, S:N185D, China/Australia, from sars-cov-2-variants/lineage-proposals#867 | |
| HK.3.3 | China 24.0%, Singapore 14.0%, Canada 10.0%, United States of America 10.0%, South_Korea 10.0% | 2022-10-10 | 18 | 557 | Alias of XBB.1.9.2.5.1.1.3.3, S:S256L, N:P364L, China/Singapore, from sars-cov-2-variants/lineage-proposals#744 | |
| HK.3.4 | Canada 14.0%, Denmark 14.0%, United States of America 12.0%, Sweden 12.0%, United Kingdom 10.0% | 2023-07-31 | 134 | 595 | Alias of XBB.1.9.2.5.1.1.3.4, S:P809S, from sars-cov-2-variants/lineage-proposals#764 | |
| HK.3.5 | Singapore 61.0%, Australia 8.0%, Japan 6.0%, Sweden 5.0%, United States of America 3.0% | 2023-09-04 | 85 | 525 | Alias of XBB.1.9.2.5.1.1.3.5, S:P174S, Singapore, from sars-cov-2-variants/lineage-proposals#865 | |
| HK.3.6 | China 32.0%, Australia 26.0%, South_Korea 17.0%, United States of America 5.0%, Singapore 4.0% | 2023-08-20 | 51 | 190 | Alias of XBB.1.9.2.5.1.1.3.6, S:G181R, China, from sars-cov-2-variants/lineage-proposals#809 | |
| HK.3.7 | Singapore 25.0%, China 24.0%, Canada 20.0%, United States of America 12.0%, South_Korea 11.0% | 2023-08-14 | 31 | 110 | Alias of XBB.1.9.2.5.1.1.3.7, S:V171I, Singapore/China, from sars-cov-2-variants/lineage-proposals#793 | |
| HK.3.8 | Sweden 71.0%, France 7.0%, Italy 5.0%, Spain 5.0%, Denmark 4.0% | 2023-08-28 | 27 | 107 | Alias of XBB.1.9.2.5.1.1.3.8, S:E554K, China/Sweden, from #2377 | |
| HK.3.9 | Australia 71.0%, United States of America 11.0%, Singapore 6.0%, Italy 5.0%, New_Zealand 4.0% | 2023-09-08 | 59 | 113 | Alias of XBB.1.9.2.5.1.1.3.9, S:T732I, Australia, from sars-cov-2-variants/lineage-proposals#1092 | |
| HK.3.10 | United States of America 24.0%, Australia 20.0%, Singapore 9.0%, New_Zealand 9.0%, Japan 8.0% | 2023-08-21 | 108 | 246 | Alias of XBB.1.9.2.5.1.1.3.10, S:A1078S, from sars-cov-2-variants/lineage-proposals#1055 | |
| HK.3.11 | China 59.0%, South_Korea 22.0%, United States of America 14.0%, France 1.0%, Canada 1.0% | 2023-08-04 | 24 | 85 | Lineage reassigned. Withdrawn, as part of 14988C sublineage of EG.5.1.1, not HK.3: Alias of XBB.1.9.2.5.1.1.3.11, S:A475V, Finland/Denmark/Sweden | |
| HK.3.12 | United States of America 75.0%, Canada 17.0%, France 2.0%, Netherlands 2.0%, Denmark 1.0% | 2023-08-18 | 52 | 170 | Alias of XBB.1.9.2.5.1.1.3.12, S:A688T, USA, from sars-cov-2-variants/lineage-proposals#886 | |
| HK.3.13 | China 54.0%, United States of America 15.0%, South_Korea 11.0%, Japan 7.0%, Australia 3.0% | 2023-09-02 | 95 | 330 | Alias of XBB.1.9.2.5.1.1.3.13, S:Q14R, China, from sars-cov-2-variants/lineage-proposals#601 | |
| HK.3.14 | United States of America 33.0%, Australia 17.0%, Japan 14.0%, South_Korea 13.0%, United Kingdom 6.0% | 2023-02-01 | 49 | 243 | Alias of XBB.1.9.2.5.1.1.3.14, S:A475V, ORF1b:2378T, England/Australia, from sars-cov-2-variants/lineage-proposals#978 | |
| HK.4 | China 60.0%, South_Korea 14.0%, United States of America 8.0%, Netherlands 4.0%, Sweden 4.0% | 2023-05-06 | 13 | 109 | Alias of XBB.1.9.2.5.1.1.4, S:T883I, China | |
| HK.6 | United Kingdom 23.0%, United States of America 16.0%, Spain 13.0%, Canada 7.0%, Greece 6.0% | 2023-06-26 | 76 | 2460 | Alias of XBB.1.9.2.5.1.1.6, S:D253G, ORF1a:A1923T, on T14988C branch UK/USA, from #2184 | |
| HK.7 | United States of America 60.0%, Canada 13.0%, China 5.0%, United Kingdom 4.0%, Australia 2.0% | 2023-05-05 | 37 | 299 | Alias of XBB.1.9.2.5.1.1.7, S:N148T, China | |
| HK.8 | China 41.0%, South_Korea 8.0%, Japan 8.0%, United States of America 7.0%, Singapore 5.0% | 2023-06-27 | 25 | 545 | Alias of XBB.1.9.2.5.1.1.8, S:L455F (G22927T), on C11779T branch, China, from #2230 | |
| HK.8.1 | China 46.0%, United States of America 36.0%, Canada 5.0%, South_Korea 3.0%, Japan 1.0% | 2023-07-17 | 96 | 286 | Alias of XBB.1.9.2.5.1.1.8.1, S:D1153Y, China, from #2356 | |
| HK.11 | United States of America 25.0%, United Kingdom 25.0%, Canada 14.0%, Italy 10.0%, South_Korea 6.0% | 2023-06-05 | 73 | 461 | Alias of XBB.1.9.2.5.1.1.11, S:G184S, China/England/SouthKorea, from #2255 | |
| HK.11.1 | United States of America 16.0%, France 15.0%, Poland 12.0%, South_Korea 11.0%, Italy 8.0% | 2023-08-21 | 55 | 397 | Alias of XBB.1.9.2.5.1.1.11.1, S:L455F (G22927T), from sars-cov-2-variants/lineage-proposals#537 | |
| HK.12 | Singapore 38.0%, China 13.0%, South_Korea 13.0%, Canada 9.0%, Japan 6.0% | 2023-05-16 | 15 | 276 | Alias of XBB.1.9.2.5.1.1.12, S:K356T, China/Singapore | |
| HK.13 | China 16.0%, United States of America 15.0%, Canada 15.0%, South_Korea 12.0%, United Kingdom 6.0% | 2023-07-08 | 128 | 1406 | Alias of XBB.1.9.2.5.1.1.13, S:L455F (G22927C), China, from sars-cov-2-variants/lineage-proposals#537 | |
| HK.13.1 | Singapore 26.0%, China 13.0%, United States of America 9.0%, Japan 5.0%, Australia 4.0% | 2023-07-10 | 70 | 775 | Alias of XBB.1.9.2.5.1.1.13.1, C13378T, A24604G | |
| HK.13.2 | China 24.0%, South_Korea 23.0%, United Kingdom 14.0%, Canada 9.0%, Australia 5.0% | 2023-01-03 | 29 | 205 | Alias of XBB.1.9.2.5.1.1.13.2, S:F797L, S:D1153H, from sars-cov-2-variants/lineage-proposals#943 | |
| HK.13.2.1 | Greece 60.0%, United States of America 20.0%, Czech_Republic 3.0%, Germany 2.0%, Netherlands 2.0% | 2023-09-18 | 111 | 123 | Alias of XBB.1.9.2.5.1.1.13.2.1, S:T250I, N:T379I, Greece, from #2480 | |
| HK.16 | United Kingdom 19.0%, France 15.0%, United States of America 13.0%, Japan 11.0%, Canada 10.0% | 2023-07-19 | 69 | 126 | Alias of XBB.1.9.2.5.1.1.16, N:P67S, S:A684V, S:V1264L, from sars-cov-2-variants/lineage-proposals#841 | |
| HK.17 | China 27.0%, United States of America 18.0%, Russia 12.0%, South_Korea 6.0%, Italy 4.0% | 2023-06-25 | 47 | 147 | Alias of XBB.1.9.2.5.1.1.17, S:S494P, China | |
| HK.19 | China 26.0%, Canada 16.0%, United States of America 16.0%, Sweden 12.0%, South_Korea 6.0% | 2023-06-18 | 76 | 422 | Alias of XBB.1.9.2.5.1.1.19, S:F157L | |
| HK.20 | United States of America 45.0%, China 20.0%, Singapore 15.0%, France 10.0%, Spain 5.0% | 2023-08-13 | 14 | 20 | Alias of XBB.1.9.2.5.1.1.20, S:L455F (G22927T), on ORF1a:P2144S branch, China, from sars-cov-2-variants/lineage-proposals#537 | |
| HK.20.1 | United States of America 40.0%, Japan 12.0%, Canada 11.0%, South_Korea 5.0%, United Kingdom 5.0% | 2023-08-13 | 62 | 848 | Alias of XBB.1.9.2.5.1.1.20.1, S:G482R, from sars-cov-2-variants/lineage-proposals#537 | |
| HK.22 | Australia 79.0%, New_Zealand 6.0%, United States of America 5.0%, Japan 3.0%, China 2.0% | 2023-09-17 | 14 | 247 | Alias of XBB.1.9.2.5.1.1.22, S:L452Q, S:L455F (G22927T), Australia/China, from #2357 | |
| HK.23 | South_Korea 27.0%, China 17.0%, United Kingdom 12.0%, Japan 9.0%, Singapore 6.0% | 2023-06-12 | 64 | 161 | Alias of XBB.1.9.2.5.1.1.23, ORF8:A65V | |
| HK.23.1 | Singapore 44.0%, China 16.0%, Japan 12.0%, South_Korea 10.0%, United States of America 4.0% | 2023-08-05 | 175 | 251 | Alias of XBB.1.9.2.5.1.1.23.1, S:L455F (G22927T), ORF1a:T2906N, from sars-cov-2-variants/lineage-proposals#537 | |
| HK.23.1.1 | Canada 69.0%, China 10.0%, Japan 7.0%, Germany 6.0%, Australia 4.0% | 2023-08-29 | 70 | 90 | Alias of XBB.1.9.2.5.1.1.23.1.1, S:A348S, China/Canada, from sars-cov-2-variants/lineage-proposals#537 | |
| HK.24 | China 33.0%, United States of America 25.0%, Switzerland 17.0%, Japan 17.0%, France 8.0% | 2023-07-26 | 7 | 12 | Alias of XBB.1.9.2.5.1.1.24, S:E654K | |
| HK.24.1 | Australia 33.0%, United States of America 15.0%, United Kingdom 12.0%, Canada 8.0%, South_Korea 8.0% | 2023-08-26 | 43 | 225 | Alias of XBB.1.9.2.5.1.1.24.1, S:L455F (G22927T), Australia, from sars-cov-2-variants/lineage-proposals#537 | |
| HK.26 | United States of America 22.0%, Canada 18.0%, Finland 10.0%, France 8.0%, Sweden 4.0% | 2023-08-02 | 621 | 1539 | Alias of XBB.1.9.2.5.1.1.26, S:L455F (G22927T), ORF3a:L52I, on 14988C branch, Finland, from sars-cov-2-variants/lineage-proposals#763 | |
| HK.26.1 | Finland 56.0%, Sweden 24.0%, Denmark 13.0%, United States of America 2.0%, United Kingdom 2.0% | 2023-08-12 | 42 | 127 | Alias of XBB.1.9.2.5.1.1.26.1, S:A475V, Finland, formerly HK.3.11, from sars-cov-2-variants/lineage-proposals#763 | |
| HK.27 | Singapore 22.0%, United States of America 16.0%, China 10.0%, South_Korea 9.0%, Japan 8.0% | 2023-05-22 | 471 | 554 | Alias of XBB.1.9.2.5.1.1.27, ORF1a:T1589I, China | |
| HK.27.1 | South_Korea 30.0%, China 20.0%, Canada 13.0%, United States of America 12.0%, Singapore 5.0% | 2023-06-27 | 906 | 1720 | Alias of XBB.1.9.2.5.1.1.27.1, S:L455F (G22927T), China, from sars-cov-2-variants/lineage-proposals#525 | |
| HK.27.1.1 | China 46.0%, United States of America 24.0%, Japan 10.0%, Canada 7.0%, South_Korea 4.0% | 2023-08-17 | 128 | 242 | Alias of XBB.1.9.2.5.1.1.27.1.1, S:Q14H, China | |
| HK.28 | Japan 35.0%, United States of America 23.0%, China 7.0%, South_Korea 5.0%, Canada 4.0% | 2023-05-15 | 909 | 1420 | Alias of XBB.1.9.2.5.1.1.28, C19170T, China | |
| HK.29 | United States of America 72.0%, Canada 16.0%, Australia 2.0%, Denmark 2.0%, United Kingdom 1.0% | 2023-05-31 | 754 | 804 | Alias of XBB.1.9.2.5.1.1.29, ORF1a:G2509D, North America | |
| HK.30 | Canada 16.0%, United States of America 12.0%, Russia 11.0%, United Kingdom 10.0%, Spain 9.0% | 2022-10-10 | 808 | 1065 | Alias of XBB.1.9.2.5.1.1.30, T26609C, China | |
| HK.31 | United States of America 69.0%, Canada 19.0%, Sweden 3.0%, Australia 2.0%, Ireland 1.0% | 2023-01-11 | 675 | 959 | Alias of XBB.1.9.2.5.1.1.31, ORF1a:G604S | |
| HK.32 | China 34.0%, South_Korea 29.0%, United States of America 15.0%, Japan 4.0%, Singapore 3.0% | 2023-07-27 | 63 | 232 | Alias of XBB.1.9.2.5.1.1.32, S:Q14R, ORF1a:S2193F, China, from sars-cov-2-variants/lineage-proposals#601 | |
| HK.33 | United States of America 33.0%, Canada 21.0%, New_Zealand 16.0%, South_Korea 11.0%, China 4.0% | 2023-08-21 | 86 | 135 | Alias of XBB.1.9.2.5.1.1.33, S:L455F (G22927T) on C2644T branch, North America, from sars-cov-2-variants/lineage-proposals#537 | |
| HK.34.1 | Singapore 87.0%, United States of America 5.0%, United Kingdom 3.0%, Japan 2.0%, Netherlands 2.0% | 2023-09-18 | 63 | 63 | Alias of XBB.1.9.2.5.1.1.34.1, S:K356T, Singapore, from sars-cov-2-variants/lineage-proposals#1048 | |
| EG.5.1.2 | Japan 57.0%, United States of America 20.0%, Spain 5.0%, Canada 4.0%, United Kingdom 3.0% | 2023-04-06 | 64 | 760 | Alias of XBB.1.9.2.5.1.2, Japan, ORF1b:V1644I, from sars-cov-2-variants/lineage-proposals#301 | |
| EG.5.1.3 | United States of America 21.0%, France 17.0%, Canada 10.0%, Spain 9.0%, United Kingdom 9.0% | 2023-01-03 | 126 | 13605 | Alias of XBB.1.9.2.5.1.3, ORF1a:R542C, C22570T, from sars-cov-2-variants/lineage-proposals#222 | |
| JG.1 | France 42.0%, Spain 13.0%, United States of America 11.0%, United Kingdom 7.0%, Australia 5.0% | 2023-06-28 | 42 | 427 | Alias of XBB.1.9.2.5.1.3.1, S:T732I, France, from #2218 | |
| JG.2 | United States of America 19.0%, United Kingdom 13.0%, Spain 12.0%, France 11.0%, Italy 11.0% | 2023-06-27 | 36 | 304 | Alias of XBB.1.9.2.5.1.3.2, S:G75V, Europe, from #2249 | |
| JG.3 | United States of America 18.0%, France 13.0%, Spain 10.0%, Canada 10.0%, United Kingdom 7.0% | 2022-01-12 | 61 | 9341 | Alias of XBB.1.9.2.5.1.3.3, S:L455F (G22927T), S:S704L, Europe, from #2231 | |
| JG.3.1 | United States of America 23.0%, Sweden 15.0%, Canada 9.0%, United Kingdom 8.0%, Denmark 8.0% | 2023-06-26 | 146 | 1955 | Alias of XBB.1.9.2.5.1.3.3.1, S:T307I, from sars-cov-2-variants/lineage-proposals#829 | |
| JG.3.2 | Canada 60.0%, United States of America 28.0%, Japan 7.0%, Australia 2.0%, France 1.0% | 2022-12-07 | 47 | 1981 | Alias of XBB.1.9.2.5.1.3.3.2, S:N450D, Canada, from #2376 | |
| JG.3.3 | Belgium 54.0%, Netherlands 20.0%, United Kingdom 4.0%, Germany 3.0%, Sweden 3.0% | 2023-08-29 | 33 | 97 | Alias of XBB.1.9.2.5.1.3.3.3, S:A83S, Belgium, from #2363 | |
| JG.3.4 | United States of America 97.0%, Canada 3.0% | 2023-09-24 | 23 | 90 | Alias of XBB.1.9.2.5.1.3.3.4, S:478R, USA, from sars-cov-2-variants/lineage-proposals#1081 | |
| JG.4 | Canada 16.0%, Germany 9.0%, Netherlands 8.0%, United Kingdom 8.0%, Sweden 6.0% | 2023-05-28 | 192 | 435 | Alias of XBB.1.9.2.5.1.3.4, C1684T, Europe | |
| EG.5.1.4 | United States of America 44.0%, Canada 18.0%, United Kingdom 7.0%, Spain 4.0%, France 4.0% | 2023-04-03 | 117 | 6808 | Alias of XBB.1.9.2.5.1.4, ORF1b:K2557R, from #2117 | |
| JJ.1 | Japan 55.0%, United States of America 12.0%, China 6.0%, Canada 5.0%, South_Korea 5.0% | 2023-06-28 | 27 | 536 | Alias of XBB.1.9.2.5.1.4.1, S:L455F (G22927T), ORF3a:I47V, China/Japan, from #2208 | |
| EG.5.1.5 | Spain 23.0%, United States of America 19.0%, Portugal 13.0%, United Kingdom 9.0%, France 8.0% | 2023-04-23 | 40 | 593 | Alias of XBB.1.9.2.5.1.5, ORF1a:L3293I, ORF1b:T1274I, ORF1b:L2349V, Portugal | |
| EG.5.1.6 | United States of America 47.0%, Canada 16.0%, United Kingdom 8.0%, France 4.0%, Spain 3.0% | 2022-10-07 | 24 | 5753 | Alias of XBB.1.9.2.5.1.6, S:F157L, ORF1a:S1857L, USA, from sars-cov-2-variants/lineage-proposals#394 | |
| HV.1 | United States of America 52.0%, Canada 27.0%, United Kingdom 2.0%, Sweden 2.0%, France 2.0% | 2023-01-03 | 11 | 38011 | Alias of XBB.1.9.2.5.1.6.1, S:L452R, USA | |
| HV.1.1 | United States of America 61.0%, Canada 21.0%, Japan 4.0%, Switzerland 2.0%, United Kingdom 2.0% | 2023-08-15 | 19 | 1594 | Alias of XBB.1.9.2.5.1.6.1.1, S:K444T, on ORF1a:T4083M branch, USA, from sars-cov-2-variants/lineage-proposals#866 | |
| HV.1.2 | United States of America 63.0%, Canada 16.0%, Australia 11.0%, United Kingdom 5.0%, Netherlands 1.0% | 2023-08-13 | 19 | 598 | Alias of XBB.1.9.2.5.1.6.1.2, S:S514F, on ORF1a:T4083M branch, USA, from sars-cov-2-variants/lineage-proposals#957 | |
| HV.1.3 | United States of America 60.0%, Sweden 18.0%, Canada 14.0%, France 3.0%, Germany 1.0% | 2023-08-14 | 17 | 159 | Alias of XBB.1.9.2.5.1.6.1.3, S:493L, USA, from sars-cov-2-variants/lineage-proposals#924 | |
| HV.1.4 | United States of America 53.0%, Canada 33.0%, France 4.0%, Singapore 2.0%, Sweden 2.0% | 2023-07-21 | 49 | 598 | Alias of XBB.1.9.2.5.1.6.1.4, S:A1078S, USA, from sars-cov-2-variants/lineage-proposals#957 | |
| HV.1.5 | United States of America 49.0%, Canada 40.0%, Australia 3.0%, Japan 2.0%, Brazil 2.0% | 2023-08-23 | 178 | 540 | Alias of XBB.1.9.2.5.1.6.1.5, S:L1265F, USA/Canada, from sars-cov-2-variants/lineage-proposals#957 | |
| HV.1.6 | United States of America 45.0%, Canada 29.0%, France 5.0%, Denmark 3.0%, United Kingdom 3.0% | 2023-04-12 | 326 | 613 | Alias of XBB.1.9.2.5.1.6.1.6, ORF1a:T1794I, ORF1a:P2018S, Canada/USA | |
| HV.1.6.1 | Canada 85.0%, United States of America 4.0%, France 3.0%, Italy 2.0%, United Kingdom 1.0% | 2023-09-03 | 102 | 231 | Alias of XBB.1.9.2.5.1.6.1.6.1, S:S704L, Canada, from sars-cov-2-variants/lineage-proposals#957 | |
| KL.1 | Canada 76.0%, United States of America 17.0%, Japan 4.0%, South_Korea 1.0%, United Kingdom 0.0% | 2023-10-13 | 228 | 331 | Alias of XBB.1.9.2.5.1.6.1.6.1.1, S:K444N, Canada, from sars-cov-2-variants/lineage-proposals#1174 | |
| KL.1.1 | Canada 80.0%, United States of America 14.0%, United Kingdom 4.0%, Japan 2.0% | 2023-10-27 | 68 | 84 | Alias of XBB.1.9.2.5.1.6.1.6.1.1.1, S:H1101Y, Canada | |
| HV.1.8 | United States of America 89.0%, Canada 4.0%, Ecuador 3.0%, Spain 1.0%, Netherlands 1.0% | 2023-08-07 | 158 | 234 | Alias of XBB.1.9.2.5.1.6.1.8, S:T208M, USA, from #2432 | |
| HV.1.9 | New_Zealand 76.0%, United States of America 12.0%, Australia 5.0%, Sweden 2.0%, United Kingdom 1.0% | 2023-10-02 | 76 | 110 | Alias of XBB.1.9.2.5.1.6.1.9, S:N211I, S:T1117I, New Zealand, from sars-cov-2-variants/lineage-proposals#957 | |
| HV.1.10 | United States of America 99.0%, Canada 1.0% | 2023-09-21 | 64 | 126 | Alias of XBB.1.9.2.5.1.6.1.10, S:R452W, USA, from sars-cov-2-variants/lineage-proposals#1044 | |
| HV.1.11 | United States of America 91.0%, Canada 5.0%, India 4.0% | 2023-10-16 | 20 | 74 | Alias of XBB.1.9.2.5.1.6.1.11, S:N450D, USA | |
| HV.2 | Canada 46.0%, United States of America 21.0%, United Kingdom 10.0%, Israel 5.0%, Australia 4.0% | 2023-09-11 | 76 | 185 | Alias of XBB.1.9.2.5.1.6.2, S:L455F (G22927T), Canada, from sars-cov-2-variants/lineage-proposals#537 | |
| EG.5.1.7 | United Kingdom 38.0%, United States of America 27.0%, Ireland 6.0%, Luxembourg 5.0%, Canada 4.0% | 2023-07-14 | 14 | 242 | Alias of XBB.1.9.2.5.1.7, S:K278N | |
| EG.5.1.8 | United States of America 16.0%, China 15.0%, South_Korea 10.0%, Japan 8.0%, Singapore 7.0% | 2022-12-31 | 51 | 2821 | Alias of XBB.1.9.2.5.1.8, S:L455F (G22927T), China, on C29762T branch, from sars-cov-2-variants/lineage-proposals#537 | |
| KB.1 | United States of America 37.0%, Canada 20.0%, Japan 7.0%, China 6.0%, France 5.0% | 2023-07-24 | 68 | 428 | Alias of XBB.1.9.2.5.1.8.1, S:E654V, China, from #2347 | |
| KB.2 | South_Korea 38.0%, Japan 16.0%, United Kingdom 13.0%, United States of America 12.0%, China 10.0% | 2023-08-16 | 50 | 150 | Alias of XBB.1.9.2.5.1.8.2, S:R214H | |
| KB.3 | New_Zealand 88.0%, Australia 8.0%, Canada 2.0%, United States of America 1.0%, Denmark 1.0% | 2023-08-26 | 70 | 143 | Alias of XBB.1.9.2.5.1.8.2, S:A83T, from sars-cov-2-variants/lineage-proposals#1052 | |
| KB.4 | United States of America 67.0%, Japan 13.0%, Spain 4.0%, Austria 4.0%, United Kingdom 3.0% | 2023-07-29 | 88 | 171 | Alias of XBB.1.9.2.5.1.8.2, S:T95I, from sars-cov-2-variants/lineage-proposals#891 | |
| EG.5.1.9 | United States of America 45.0%, Canada 17.0%, United Kingdom 8.0%, France 6.0%, Spain 4.0% | 2023-07-03 | 76 | 421 | Alias of XBB.1.9.2.5.1.9, S:L176F (on ORF1a:D982G branch) | |
| EG.5.1.11 | Russia 32.0%, Finland 10.0%, France 7.0%, Japan 7.0%, Poland 4.0% | 2023-04-12 | 12 | 71 | Alias of XBB.1.9.2.5.1.11, S:K182Q, Indonesia | |
| JR.1.1 | United States of America 22.0%, United Kingdom 14.0%, Greece 12.0%, France 7.0%, Spain 7.0% | 2023-08-14 | 7 | 600 | Alias of XBB.1.9.2.5.1.11.1.1, S:L455F (G22927C), from sars-cov-2-variants/lineage-proposals#537 | |
| JR.1.1.1 | Thailand 25.0%, United States of America 21.0%, Australia 17.0%, Japan 15.0%, Canada 10.0% | 2023-09-12 | 19 | 48 | Alias of XBB.1.9.2.5.1.11.1.1.1, S:K356Q, Thailand, from sars-cov-2-variants/lineage-proposals#1015 | |
| EG.5.1.12 | South_Korea 60.0%, Japan 17.0%, United States of America 7.0%, Canada 5.0%, Singapore 2.0% | 2023-05-10 | 729 | 919 | Alias of XBB.1.9.2.5.1.12, T26972C, C28909T | |
| EG.5.1.13 | United States of America 41.0%, France 10.0%, Canada 9.0%, Sweden 6.0%, United Kingdom 5.0% | 2023-03-20 | 1817 | 2454 | Alias of XBB.1.9.2.5.1.13, C12439T | |
| EG.5.1.14 | United States of America 78.0%, Canada 7.0%, United Kingdom 3.0%, Sweden 2.0%, France 1.0% | 2023-04-03 | 794 | 951 | Alias of XBB.1.9.2.5.1.14, C16017T, C19524T | |
| EG.5.1.15 | United States of America 37.0%, Canada 13.0%, Spain 7.0%, South_Korea 6.0%, Sweden 5.0% | 2023-04-15 | 760 | 851 | Alias of XBB.1.9.2.5.1.15, ORF1a:T753I | |
| EG.5.1.16 | United States of America 77.0%, Canada 12.0%, Sweden 2.0%, Japan 1.0%, France 1.0% | 2023-04-16 | 1712 | 2077 | Alias of XBB.1.9.2.5.1.16, ORF1b:A2431V, from sars-cov-2-variants/lineage-proposals#899 | |
| EG.5.1.17 | China 32.0%, Japan 23.0%, United States of America 12.0%, Singapore 9.0%, Thailand 5.0% | 2023-06-28 | 49 | 75 | Alias of XBB.1.9.2.5.1.17, S:L455F (G22927C), China, from sars-cov-2-variants/lineage-proposals#537 | |
| EG.5.1.18 | South_Korea 52.0%, Japan 36.0%, United States of America 4.0%, China 3.0%, Australia 1.0% | 2023-05-04 | 598 | 645 | Alias of XBB.1.9.2.5.1.18, ORF1a:G3002S, ORF3a:S220I | |
| EG.5.1.19 | United Kingdom 29.0%, United States of America 27.0%, Canada 9.0%, Netherlands 6.0%, France 6.0% | 2023-06-01 | 482 | 601 | Alias of XBB.1.9.2.5.1.19, S:L455F (G22927T), ORF1b:K1383R, ORF3a:M260K, from sars-cov-2-variants/lineage-proposals#537 | |
| EG.5.2 | United States of America 43.0%, Canada 10.0%, South_Korea 7.0%, Colombia 7.0%, Japan 6.0% | 2023-02-27 | 122 | 1498 | Alias of XBB.1.9.2.5.2, N:L161F | |
| EG.5.2.1 | United States of America 71.0%, Canada 14.0%, Greece 4.0%, United Kingdom 2.0%, France 2.0% | 2022-12-31 | 34 | 553 | Alias of XBB.1.9.2.5.2.1, S:S704L, USA, from sars-cov-2-variants/lineage-proposals#189 | |
| EG.5.2.2 | China 61.0%, United States of America 20.0%, South_Korea 5.0%, Canada 4.0%, Australia 2.0% | 2023-03-18 | 41 | 82 | Alias of XBB.1.9.2.5.2.2, ORF1b:T239I, China | |
| EG.6.1 | United States of America 39.0%, Canada 25.0%, Israel 9.0%, United Kingdom 5.0%, France 4.0% | 2023-02-14 | 69 | 4375 | Alias of XBB.1.9.2.6.1, S:F456L (T22928C), Israel/Japan/Canada, from #1950 | |
| EG.6.1.1 | Canada 24.0%, United States of America 23.0%, France 12.0%, Greece 6.0%, Spain 5.0% | 2023-07-07 | 13 | 320 | Alias of XBB.1.9.2.6.1.1, S:484K, S:L242I, from sars-cov-2-variants/lineage-proposals#546 | |
| EG.6.1.2 | Israel 54.0%, United States of America 12.0%, Greece 5.0%, Luxembourg 4.0%, France 4.0% | 2023-06-21 | 83 | 104 | Alias of XBB.1.9.2.6.1.2, S:V705I, Israel, from sars-cov-2-variants/lineage-proposals#826 | |
| EG.7 | Canada 36.0%, New_Zealand 23.0%, United States of America 16.0%, United Kingdom 15.0%, Japan 2.0% | 2023-03-18 | 61 | 499 | Alias of XBB.1.9.2.7, S:R403K, S:L513F, ORF1a:N2531S, Germany/England, from sars-cov-2-variants/lineage-proposals#56 | |
| EG.10 | Lithuania 32.0%, Germany 16.0%, United States of America 16.0%, Austria 11.0%, United Kingdom 11.0% | 2023-03-29 | 13 | 38 | Alias of XBB.1.9.2.10, S:A344T, S:R403K, Germany/Austria, from sars-cov-2-variants/lineage-proposals#346 | |
| EG.10.1 | United States of America 69.0%, United Kingdom 17.0%, Germany 4.0%, Spain 2.0%, Switzerland 1.0% | 2023-05-30 | 14 | 245 | Alias of XBB.1.9.2.10.1, S:S494P, S:A701V, from sars-cov-2-variants/lineage-proposals#346 | |
| EG.10.1.1 | United Kingdom 18.0%, Germany 13.0%, France 11.0%, United States of America 9.0%, Spain 8.0% | 2023-06-07 | 1245 | 1405 | Alias of XBB.1.9.2.10.1.1, ORF1a:V2703L, ORF1a:V3683I, ORF1b:P1570S | |
| XBB.1.16 | United States of America 23.0%, India 16.0%, Japan 12.0%, United Kingdom 6.0%, Canada 6.0% | 2020-11-20 | 10 | 34101 | Defined by S:E180V, S:478R, found in India, USA, Singapore, and Europe, from #1723 | |
| XBB.1.16.1 | United States of America 29.0%, India 11.0%, Japan 11.0%, Singapore 6.0%, Australia 5.0% | 2023-01-04 | 46 | 11168 | Defined by S:T547I, from #1772 | |
| FU.1 | China 40.0%, United States of America 20.0%, Japan 8.0%, South_Korea 5.0%, Singapore 5.0% | 2023-02-13 | 127 | 6227 | Alias of XBB.1.16.1.1, T3802C | |
| FU.2 | United States of America 53.0%, Mexico 6.0%, Canada 5.0%, Singapore 5.0%, Guatemala 4.0% | 2023-02-09 | 78 | 2352 | Alias of XBB.1.16.1.2, C8692T | |
| FU.2.1 | United States of America 47.0%, Canada 15.0%, Sweden 12.0%, South_Korea 5.0%, China 5.0% | 2023-03-22 | 61 | 1455 | Alias of XBB.1.16.1.2.1, S:E619Q, Vietnam | |
| XBB.1.16.2 | United States of America 18.0%, India 17.0%, Japan 10.0%, Australia 9.0%, Canada 8.0% | 2023-02-20 | 212 | 3004 | Defined by ORF3a:V13L, ORF1a:P926H, India, from #1802 | |
| GY.1.1.1 | Thailand 80.0%, Japan 20.0% | 2023-06-20 | 9 | 30 | Alias of XBB.1.16.2.1.1.1, S:A475V, Thailand, from sars-cov-2-variants/lineage-proposals#804 | |
| XBB.1.16.4 | United States of America 28.0%, Australia 16.0%, Japan 13.0%, India 12.0%, South_Korea 8.0% | 2023-02-20 | 78 | 426 | Defined by S:T678I, India, from #1903 | |
| XBB.1.16.6 | United States of America 66.0%, Canada 10.0%, United Kingdom 5.0%, France 2.0%, Australia 1.0% | 2023-02-08 | 122 | 12733 | S:F456L (T22930A), A12397G, USA/Canada/China/Malaysia | |
| JF.1 | United States of America 44.0%, Canada 34.0%, United Kingdom 3.0%, Ireland 3.0%, Germany 2.0% | 2023-06-27 | 10 | 1432 | Alias of XBB.1.16.6.1, S:L455F (G22927T), USA, from #2207 | |
| JF.1.1 | United States of America 48.0%, United Kingdom 11.0%, Canada 10.0%, Australia 4.0%, France 3.0% | 2023-02-20 | 1947 | 2493 | Alias of XBB.1.16.6.1.1, ORF1a:S2030L | |
| JF.1.1.2 | United States of America 60.0%, Canada 26.0%, Finland 4.0%, New_Zealand 2.0%, Japan 2.0% | 2023-09-20 | 39 | 80 | Alias of XBB.1.16.6.1.1.2, S:V1264L | |
| JF.3 | United States of America 43.0%, Australia 26.0%, Canada 21.0%, New_Zealand 2.0%, Spain 2.0% | 2023-09-05 | 40 | 47 | Alias of XBB.1.16.6.3, S:Q14H, S:L455F (G22927T), S:S810L, USA/Australia, from sars-cov-2-variants/lineage-proposals#976 | |
| JF.4 | United States of America 45.0%, Canada 12.0%, United Kingdom 7.0%, Spain 6.0%, France 5.0% | 2023-05-19 | 199 | 2286 | Alias of XBB.1.16.6.4, ORF1a:S212L, ORF8:A15V | |
| XBB.1.16.7 | Japan 68.0%, Singapore 12.0%, South_Korea 5.0%, United States of America 3.0%, Australia 2.0% | 2023-03-19 | 95 | 722 | S:T732I after T12214C, Singapore/Japan/SouthKorea | |
| XBB.1.16.9 | United States of America 47.0%, Canada 14.0%, South_Korea 8.0%, United Kingdom 7.0%, Australia 4.0% | 2023-04-25 | 47 | 1520 | S:F456L (T22930G), ORF1a:S2500F, Canada/Sweden/SouthKorea/USA | |
| XBB.1.16.11 | United States of America 38.0%, United Kingdom 12.0%, Spain 7.0%, France 6.0%, Greece 4.0% | 2020-10-23 | 101 | 9888 | S:P521T, India | |
| XBB.1.16.12 | United States of America 32.0%, South_Korea 20.0%, Japan 15.0%, Australia 5.0%, Canada 4.0% | 2023-03-25 | 79 | 570 | S:Q52H, South Korea | |
| XBB.1.16.13 | United States of America 34.0%, India 13.0%, Japan 12.0%, South_Korea 12.0%, Canada 5.0% | 2023-02-06 | 287 | 678 | ORF1a:G519S, ORF1a:G1101D, India | |
| HF.1 | Japan 30.0%, United States of America 28.0%, South_Korea 19.0%, United Kingdom 6.0%, Canada 2.0% | 2023-05-10 | 140 | 5207 | Alias of XBB.1.16.13.1, S:K304N, South Korea/Japan, from #2083 | |
| HF.1.1 | United States of America 82.0%, Canada 7.0%, Sweden 4.0%, South_Korea 1.0%, Greece 1.0% | 2023-06-13 | 70 | 834 | Alias of XBB.1.16.13.1.1, S:H1101Y, on N:A35T branch, South Korea/USA/Canada, from sars-cov-2-variants/lineage-proposals#521 | |
| HF.1.2 | United States of America 80.0%, Canada 14.0%, Mexico 2.0%, France 1.0%, United Kingdom 1.0% | 2023-06-11 | 32 | 244 | Alias of XBB.1.16.13.1.2, S:A688V, on ORF1a:P1158S branch, USA | |
| XBB.1.16.14 | United States of America 44.0%, France 14.0%, Canada 11.0%, United Kingdom 7.0%, Sweden 6.0% | 2023-03-29 | 27 | 563 | S:L452Q, after A11782G, India/France/Canada, from sars-cov-2-variants/lineage-proposals#329 | |
| XBB.1.16.15 | United States of America 32.0%, United Kingdom 23.0%, France 5.0%, Greece 5.0%, Canada 4.0% | 2022-08-01 | 41 | 4796 | S:K147N, S:P521S, T10756C, T14067C, on C27513T branch, from #2092 | |
| JM.1 | United Kingdom 78.0%, United States of America 11.0%, France 2.0%, Netherlands 2.0%, Denmark 2.0% | 2023-07-18 | 43 | 125 | Alias of XBB.1.16.15.1, S:Q52H, England/Wales, from sars-cov-2-variants/lineage-proposals#569 | |
| JM.2 | United Kingdom 29.0%, United States of America 23.0%, Netherlands 8.0%, Spain 6.0%, Belgium 6.0% | 2023-07-05 | 44 | 175 | Alias of XBB.1.16.15.2, S:R78S, Europe/North America | |
| XBB.1.16.16 | United States of America 72.0%, United Kingdom 9.0%, Canada 7.0%, France 4.0%, India 3.0% | 2023-03-24 | 59 | 397 | S:Q613H, S:S412N, India-GJ/USA/Pakistan, from sars-cov-2-variants/lineage-proposals#54 | |
| XBB.1.16.17 | Russia 69.0%, United States of America 10.0%, United Kingdom 5.0%, New_Zealand 3.0%, Canada 2.0% | 2022-11-16 | 33 | 1011 | S:E554K, mainly in NZ, from sars-cov-2-variants/lineage-proposals#354 | |
| XBB.1.16.19 | United States of America 27.0%, United Kingdom 12.0%, Japan 7.0%, Indonesia 7.0%, France 5.0% | 2023-01-04 | 411 | 1032 | ORF1b:V839I | |
| XBB.1.16.23 | United States of America 54.0%, Japan 12.0%, Canada 10.0%, South_Korea 6.0%, Russia 5.0% | 2023-04-06 | 39 | 740 | S:K304Q, India/USA/Japan/Singapore, from #2187 | |
| XBB.1.16.24 | United States of America 23.0%, India 21.0%, Sweden 10.0%, France 8.0%, Canada 5.0% | 2023-04-28 | 13 | 128 | S:K182E, S:V551I, S:E554K, on A25410G branch, India, from #2223 | |
| XBB.1.16.26 | China 34.0%, United States of America 22.0%, Canada 16.0%, South_Korea 10.0%, Denmark 3.0% | 2023-03-16 | 52 | 160 | S:L455F (G22927T), S:F456L (T22928C), China, from sars-cov-2-variants/lineage-proposals#685 | |
| XBB.1.16.27 | France 38.0%, Turkey 17.0%, United States of America 8.0%, United Kingdom 6.0%, Denmark 3.0% | 2023-08-07 | 185 | 404 | S:F456L (T22928C), S:E554K, ORF1a:A3889T, France, from #2345 | |
| XBB.1.16.28 | Russia 91.0%, Austria 1.0%, United States of America 1.0%, Netherlands 1.0%, China 1.0% | 2023-07-28 | 307 | 761 | S:V1230A, S:Q613H, S:Q675K, Russia, from sars-cov-2-variants/lineage-proposals#1000 | |
| XBB.1.16.31 | Japan 33.0%, Canada 16.0%, United States of America 8.0%, Romania 8.0%, Thailand 8.0% | 2023-03-15 | 529 | 552 | T9004C, on C7765T branch | |
| GA.2.1.1 | United States of America 40.0%, France 20.0%, Nigeria 20.0%, United Kingdom 20.0% | 2023-07-27 | 5 | 5 | Alias of XBB.1.17.1.2.1.1, S:N450D, S:K478R | |
| GA.4.1 | Canada 27.0%, United States of America 16.0%, United Kingdom 14.0%, Italy 11.0%, Germany 4.0% | 2023-07-07 | 4 | 457 | Alias of XBB.1.17.1.4.1, S:K478R, S:S704L, S:E554K, USA/Qatar, from sars-cov-2-variants/lineage-proposals#661 | |
| GA.4.1.3 | United States of America 38.0%, United Kingdom 12.0%, Canada 12.0%, Belgium 12.0%, Nigeria 8.0% | 2023-08-11 | 13 | 24 | Alias of XBB.1.17.1.4.1.3, S:185insLAG, S:F186D, N:K370N, ORF1a:V1339I, from sars-cov-2-variants/lineage-proposals#968 | |
| GA.5 | Germany 33.0%, France 16.0%, Italy 12.0%, United States of America 8.0%, Netherlands 6.0% | 2023-02-06 | 151 | 165 | Alias of XBB.1.17.1.5, T23797C | |
| GA.7.1 | France 32.0%, Cote_d'Ivoire 24.0%, Canada 20.0%, United Kingdom 7.0%, Denmark 7.0% | 2023-08-21 | 18 | 41 | Alias of XBB.1.17.1.7.1, S:P521S, S:N148T, S:S494P, S:Q218R, from sars-cov-2-variants/lineage-proposals#755 | |
| GA.10.1 | Canada 55.0%, United States of America 27.0%, France 18.0% | 2023-09-15 | 7 | 11 | Alias of XBB.1.17.1.10.1, S:L455F (G22927T), S:F456L (T22928C), S:K478R, ORF1a:A776V, ORF1a:F1214S, ORF1b:K1947R, from sars-cov-2-variants/lineage-proposals#919 | |
| FE.1.1.5 | Brazil 50.0%, United States of America 16.0%, Paraguay 7.0%, Greece 7.0%, Denmark 5.0% | 2023-04-09 | 76 | 123 | Alias of XBB.1.18.1.1.1.5, S:E554K, Brazil, from sars-cov-2-variants/lineage-proposals#556 | |
| FE.1.2 | Brazil 52.0%, United States of America 24.0%, Spain 5.0%, United Kingdom 3.0%, Canada 3.0% | 2022-06-28 | 182 | 1895 | Alias of XBB.1.18.1.1.2, A5488G | |
| XBB.1.19.1 | Pakistan 15.0%, Australia 12.0%, United States of America 12.0%, United Kingdom 9.0%, Japan 8.0% | 2023-01-18 | 37 | 585 | Defined by S:E554K, Pakistan, from #1765 | |
| GW.5 | United States of America 24.0%, Bahrain 12.0%, Canada 12.0%, United Kingdom 10.0%, Australia 6.0% | 2023-05-30 | 24 | 82 | Alias of XBB.1.19.1.5, S:L455F (G22927T), S:F456L (T22928C), S:K478I, Pakistan, from #2142 | |
| GW.5.1 | United States of America 26.0%, Canada 13.0%, United Kingdom 10.0%, Greece 10.0%, Bahrain 7.0% | 2023-04-06 | 24 | 126 | Alias of XBB.1.19.1.5.1, ORF3a:W149C, Pakistan | |
| GW.5.1.1 | Australia 28.0%, United Kingdom 25.0%, United States of America 23.0%, New_Zealand 4.0%, Canada 3.0% | 2023-07-31 | 4 | 197 | Alias of XBB.1.19.1.5.1.1, S:A475V, S:F79S, Pakistan, from #2277 | |
| KE.1 | United Kingdom 95.0%, Denmark 1.0%, United States of America 1.0%, Ireland 1.0%, Switzerland 1.0% | 2023-10-01 | 32 | 85 | Alias of XBB.1.19.1.5.1.1.1, S:F186S, England/Wales | |
| KE.2 | United Kingdom 88.0%, United States of America 6.0%, Netherlands 6.0% | 2023-08-06 | 10 | 16 | Alias of XBB.1.19.1.5.1.1.2, S:S704L, UK, from sars-cov-2-variants/lineage-proposals#945 | |
| KE.3 | United Kingdom 76.0%, United States of America 6.0%, Denmark 3.0%, Sweden 2.0%, France 2.0% | 2023-08-23 | 190 | 246 | Alias of XBB.1.19.1.5.1.1.3, ORF1a:L3641S, ORF1a:T5131I, ORF7a:M1K, UK | |
| GW.5.3 | United Kingdom 25.0%, United States of America 24.0%, France 8.0%, Ireland 7.0%, Pakistan 5.0% | 2023-05-12 | 94 | 167 | Alias of XBB.1.19.1.5.3, T20310C, C28519T, from sars-cov-2-variants/lineage-proposals#815 | |
| GW.5.3.1 | United Kingdom 16.0%, United States of America 14.0%, Canada 8.0%, Indonesia 8.0%, Sweden 5.0% | 2023-05-10 | 11 | 225 | Alias of XBB.1.19.1.5.3.1, S:A475V, S:G184A, from sars-cov-2-variants/lineage-proposals#815 | |
| XBB.1.22 | United States of America 52.0%, Ireland 6.0%, China 5.0%, France 5.0%, United Kingdom 4.0% | 2022-12-26 | 11 | 626 | Defined by S:486P, on ORF9b:I5T branch, from #1704 | |
| FY.1.2 | United States of America 15.0%, Israel 15.0%, United Kingdom 13.0%, Greece 7.0%, Sweden 5.0% | 2023-02-08 | 70 | 576 | Alias of XBB.1.22.1.1.2, S:T572I, ORF1b:P218L, Europe | |
| FY.1.2.1 | Spain 30.0%, United States of America 18.0%, Canada 13.0%, Australia 10.0%, United Kingdom 10.0% | 2023-06-12 | 133 | 150 | Alias of XBB.1.22.1.1.2.1, S:W64L, from sars-cov-2-variants/lineage-proposals#863 | |
| FY.1.2.2 | Bulgaria 32.0%, Greece 15.0%, Sweden 9.0%, United Kingdom 9.0%, Finland 6.0% | 2023-04-24 | 163 | 217 | Alias of XBB.1.22.1.1.2.2, S:V1129I | |
| FY.2 | Japan 38.0%, United States of America 19.0%, South_Korea 19.0%, Canada 4.0%, Australia 2.0% | 2023-03-16 | 36 | 1505 | Alias of XBB.1.22.1.2, S:I197T, ORF1b:S997P, Indonesia, from #1859 | |
| FY.3 | China 60.0%, South_Korea 13.0%, Japan 12.0%, United States of America 6.0%, Australia 3.0% | 2023-02-21 | 13 | 781 | Alias of XBB.1.22.1.3, ORF1a:E750K, C23191T, China | |
| FY.3.1 | China 64.0%, Japan 13.0%, South_Korea 6.0%, United States of America 6.0%, Canada 2.0% | 2023-03-21 | 59 | 2106 | Alias of XBB.1.22.1.3.1, S:I210T, China, from #2009 | |
| FY.3.2 | China 66.0%, United States of America 14.0%, Japan 5.0%, South_Korea 3.0%, Australia 2.0% | 2022-12-17 | 945 | 862 | Alias of XBB.1.22.1.3.2, ORF1a:E3764G, China, from #2000 | |
| FY.4.1.2 | United States of America 30.0%, United Kingdom 21.0%, South_Korea 14.0%, Kenya 14.0%, Ireland 5.0% | 2023-04-11 | 126 | 207 | Alias of XBB.1.22.1.4.1.2, ORF1a:S2926F, Kenya | |
| FY.5.1 | United Kingdom 25.0%, Australia 10.0%, United States of America 8.0%, Slovakia 6.0%, Germany 5.0% | 2023-07-30 | 15 | 162 | Alias of XBB.1.22.1.5.1, S:T572I, from sars-cov-2-variants/lineage-proposals#929 | |
| FY.5.1.1 | United States of America 23.0%, Canada 11.0%, Russia 7.0%, United Kingdom 7.0%, Indonesia 6.0% | 2023-08-25 | 5 | 391 | Alias of XBB.1.22.1.5.1.1, S:M153I, S:F186S, S:S247N, from sars-cov-2-variants/lineage-proposals#790 | |
| FY.5.2 | United States of America 27.0%, Australia 20.0%, Canada 12.0%, Indonesia 9.0%, South_Korea 7.0% | 2023-03-25 | 98 | 103 | Alias of XBB.1.22.1.5.2, S:L176F, Indonesia, on A6019G branch, from sars-cov-2-variants/lineage-proposals#267 | |
| FY.5.4 | Greece 24.0%, United Kingdom 15.0%, Ukraine 10.0%, United States of America 9.0%, Australia 8.0% | 2023-05-20 | 71 | 136 | Alias of XBB.1.22.1.5.4, S:T572I, ORF1a:D3009N, ORF1a:Y4077C on A6019G branch, from sars-cov-2-variants/lineage-proposals#929 | |
| FY.5.5 | United States of America 80.0%, Canada 7.0%, United Kingdom 5.0%, Japan 3.0%, Mexico 1.0% | 2023-05-18 | 262 | 294 | Alias of XBB.1.22.1.5.5, ORF1a:M2796I | |
| FY.5.5.1 | United States of America 59.0%, Canada 26.0%, United Kingdom 7.0%, New_Zealand 3.0%, Australia 3.0% | 2023-06-19 | 204 | 273 | Alias of XBB.1.22.1.5.5.1, S:T572I, from sars-cov-2-variants/lineage-proposals#929 | |
| FY.6.1 | Japan 82.0%, United States of America 10.0%, South_Korea 7.0%, Australia 1.0% | 2023-05-09 | 72 | 114 | Alias of XBB.1.22.1.6.1, S:S939F, Japan | |
| FY.8 | Japan 93.0%, United States of America 3.0%, Singapore 1.0%, United Kingdom 1.0%, Taiwan 0.0% | 2023-05-06 | 239 | 741 | Alias of XBB.1.22.1.8, S:T572I, from sars-cov-2-variants/lineage-proposals#635 | |
| FY.8.1 | United Kingdom 42.0%, Slovakia 22.0%, Denmark 10.0%, United States of America 6.0%, Oman 4.0% | 2023-08-16 | 50 | 67 | Alias of XBB.1.22.1.8.1, S:478R, T4579A, from sars-cov-2-variants/lineage-proposals#1002 | |
| XBB.1.24.1 | Singapore 24.0%, United States of America 20.0%, Malaysia 17.0%, South_Korea 9.0%, Japan 6.0% | 2023-02-06 | 63 | 251 | S:L518Q, Singapore | |
| XBB.1.28 | United States of America 36.0%, Indonesia 16.0%, United Kingdom 7.0%, Belgium 7.0%, Singapore 5.0% | 2022-11-14 | 4 | 58 | Defined by S:403K, Europe, from #1757 | |
| XBB.1.28.1 | United States of America 21.0%, Russia 12.0%, South_Korea 11.0%, Italy 10.0%, Austria 10.0% | 2022-11-09 | 20 | 105 | Defined by S:356T, Indonesia, global | |
| FW.1 | France 24.0%, United States of America 21.0%, United Kingdom 20.0%, Spain 12.0%, Russia 5.0% | 2023-02-10 | 22 | 140 | Alias of XBB.1.28.1.1, S:A701V, Indonesia, Europe | |
| FW.1.1.1 | United Kingdom 80.0%, United States of America 16.0%, Belgium 1.0%, Netherlands 1.0%, Spain 1.0% | 2023-09-03 | 122 | 159 | Alias of XBB.1.28.1.1.1.1, S:A684T, ORF1a:S2285F, ORF1a:K3353R, UK, from sars-cov-2-variants/lineage-proposals#1242 | |
| XBB.1.34 | United States of America 19.0%, United Kingdom 13.0%, Canada 12.0%, Australia 11.0%, Sweden 11.0% | 2022-01-17 | 63 | 102 | S:486P, S:681R, N:A50V, Uganda/Sudan, from #1621 | |
| XBB.1.41.1 | South_Africa 30.0%, France 25.0%, United States of America 16.0%, United Kingdom 10.0%, Canada 3.0% | 2023-04-24 | 10 | 559 | S:478R, Africa, from sars-cov-2-variants/lineage-proposals#150 | |
| JC.1 | United States of America 65.0%, Japan 30.0%, United Kingdom 3.0%, New_Zealand 1.0%, Thailand 0.0% | 2023-05-26 | 23 | 212 | Alias of XBB.1.41.1.1, S:K77R, Japan/Hawaii | |
| JC.2 | Greece 71.0%, United Kingdom 7.0%, France 6.0%, Australia 3.0%, Israel 1.0% | 2023-07-16 | 53 | 221 | Alias of XBB.1.41.1.2, S:D339R, ORF1a:V1056L, Greece, from sars-cov-2-variants/lineage-proposals#961 | |
| JC.4 | United States of America 69.0%, Greece 13.0%, France 4.0%, Denmark 4.0%, Italy 4.0% | 2023-07-27 | 24 | 54 | Alias of XBB.1.41.1.4, S:N148S | |
| JC.5 | United States of America 63.0%, United Kingdom 12.0%, New_Zealand 4.0%, Slovenia 3.0%, Australia 3.0% | 2022-07-27 | 291 | 533 | Alias of XBB.1.41.1.5, ORF1a:P1220L, N:H300Y, from sars-cov-2-variants/lineage-proposals#629 | |
| JC.5.1 | United States of America 70.0%, United Kingdom 29.0%, China 0.0% | 2023-08-02 | 42 | 205 | Alias of XBB.1.41.1.5.1, S:Q173K, USA | |
| JC.6 | United States of America 31.0%, South_Africa 28.0%, Sweden 18.0%, Ireland 5.0%, France 5.0% | 2023-07-24 | 13 | 39 | Alias of XBB.1.41.1.6, S:I1227V, South Africa | |
| XBB.1.41.2 | United States of America 77.0%, Canada 5.0%, Japan 4.0%, United Kingdom 3.0%, Spain 2.0% | 2023-05-26 | 32 | 447 | S:S494P, USA, from sars-cov-2-variants/lineage-proposals#389 | |
| XBB.1.42 | Japan 33.0%, United States of America 18.0%, Sweden 6.0%, Canada 5.0%, Russia 4.0% | 2022-12-11 | 93 | 635 | S:486P, S:Q613H, on ORF1a:T4175I branch with XBB.1.9, Indonesia/Malaysia/China, from #1954 | |
| XBB.1.42.1 | United States of America 17.0%, Canada 11.0%, France 9.0%, Spain 9.0%, United Kingdom 7.0% | 2023-04-21 | 29 | 659 | S:478R, from sars-cov-2-variants/lineage-proposals#198 | |
| XBB.1.42.2 | United States of America 47.0%, China 22.0%, South_Korea 11.0%, Japan 8.0%, Canada 3.0% | 2023-03-12 | 471 | 2213 | C6040T, G9049A | |
| XBB.2.3 | United States of America 23.0%, India 11.0%, Spain 10.0%, South_Korea 8.0%, Canada 5.0% | 2022-12-09 | 559 | 5727 | Defined by S:P521S and S:S486P, India/Indonesia/Singapore/USA, from #1603 and #1535 |